RNA–Protein interactions for RNA: ENST00000220849.9

EIF3E-201, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3E, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-201ENST00000220849 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
EIF3E-201ENST00000220849 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
EIF3E-201ENST00000220849 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
EIF3E-201ENST00000220849 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
EIF3E-201ENST00000220849 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
EIF3E-201ENST00000220849 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
EIF3E-201ENST00000220849 PKD2Q13563 968 aa11.13□□□□□ -0.63
EIF3E-201ENST00000220849 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
EIF3E-201ENST00000220849 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
EIF3E-201ENST00000220849 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
EIF3E-201ENST00000220849 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
EIF3E-201ENST00000220849 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
EIF3E-201ENST00000220849 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
EIF3E-201ENST00000220849 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
EIF3E-201ENST00000220849 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
EIF3E-201ENST00000220849 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
EIF3E-201ENST00000220849 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
EIF3E-201ENST00000220849 PDE4AP27815 886 aa11.05□□□□□ -0.64
EIF3E-201ENST00000220849 MAP3K9P80192 1104 aa11.05□□□□□ -0.64
EIF3E-201ENST00000220849 PHF14O94880 888 aa11.04□□□□□ -0.64
EIF3E-201ENST00000220849 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
EIF3E-201ENST00000220849 PDZRN3Q9UPQ7 1066 aa11.04□□□□□ -0.64
EIF3E-201ENST00000220849 PPP1R18Q6NYC8 613 aa11.03□□□□□ -0.64
EIF3E-201ENST00000220849 IL21Q9HBE4 155 aa10.99□□□□□ -0.65
EIF3E-201ENST00000220849 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
EIF3E-201ENST00000220849 PPP4CP60510 307 aa10.98□□□□□ -0.65
EIF3E-201ENST00000220849 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
EIF3E-201ENST00000220849 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
EIF3E-201ENST00000220849 MTRQ99707 1265 aa10.96□□□□□ -0.65
EIF3E-201ENST00000220849 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
EIF3E-201ENST00000220849 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
EIF3E-201ENST00000220849 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
EIF3E-201ENST00000220849 EPAS1Q99814 870 aa10.94□□□□□ -0.66
EIF3E-201ENST00000220849 MFSD10Q14728 455 aa10.94□□□□□ -0.66
EIF3E-201ENST00000220849 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
EIF3E-201ENST00000220849 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
EIF3E-201ENST00000220849 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
EIF3E-201ENST00000220849 LCE2AQ5TA79 106 aaPredicted RBP10.87□□□□□ -0.67
EIF3E-201ENST00000220849 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
EIF3E-201ENST00000220849 MYT1Q01538 1121 aa10.85□□□□□ -0.67
EIF3E-201ENST00000220849 TREML4Q6UXN2 200 aa10.85□□□□□ -0.67
EIF3E-201ENST00000220849 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
EIF3E-201ENST00000220849 TSKSQ9UJT2 592 aa10.85□□□□□ -0.67
EIF3E-201ENST00000220849 GGCXP38435 758 aa10.84□□□□□ -0.67
EIF3E-201ENST00000220849 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
EIF3E-201ENST00000220849 DGAT1O75907 488 aa10.84□□□□□ -0.67
EIF3E-201ENST00000220849 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
EIF3E-201ENST00000220849 POTECB2RU33 542 aa10.83□□□□□ -0.68
EIF3E-201ENST00000220849 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
EIF3E-201ENST00000220849 PKDCCQ504Y2 493 aa10.81□□□□□ -0.68
EIF3E-201ENST00000220849 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
EIF3E-201ENST00000220849 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
EIF3E-201ENST00000220849 APLP1P51693 650 aa10.77□□□□□ -0.69
EIF3E-201ENST00000220849 PRR20EP86478 221 aa10.76□□□□□ -0.69
EIF3E-201ENST00000220849 PRR20CP86479 221 aa10.76□□□□□ -0.69
EIF3E-201ENST00000220849 PRR20DP86480 221 aa10.76□□□□□ -0.69
EIF3E-201ENST00000220849 PRR20BP86481 221 aa10.76□□□□□ -0.69
EIF3E-201ENST00000220849 PRR20AP86496 221 aa10.76□□□□□ -0.69
EIF3E-201ENST00000220849 SMAPO00193 183 aa10.74□□□□□ -0.69
EIF3E-201ENST00000220849 EN1Q05925 392 aaPredicted RBP10.74□□□□□ -0.69
EIF3E-201ENST00000220849 SLC19A1P41440 591 aa10.73□□□□□ -0.69
EIF3E-201ENST00000220849 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
EIF3E-201ENST00000220849 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
EIF3E-201ENST00000220849 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
EIF3E-201ENST00000220849 EMID1Q96A84 441 aaPredicted RBP10.71□□□□□ -0.69
EIF3E-201ENST00000220849 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.69
EIF3E-201ENST00000220849 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
EIF3E-201ENST00000220849 PRSS12P56730 875 aa10.69□□□□□ -0.7
EIF3E-201ENST00000220849 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
EIF3E-201ENST00000220849 ZNF598Q86UK7 904 aaKnown RBP10.69□□□□□ -0.7
EIF3E-201ENST00000220849 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
EIF3E-201ENST00000220849 DDX12PQ92771 950 aa10.69□□□□□ -0.7
EIF3E-201ENST00000220849 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
EIF3E-201ENST00000220849 DPYSL4O14531 572 aa10.68□□□□□ -0.7
EIF3E-201ENST00000220849 TATDN2Q93075 761 aa10.68□□□□□ -0.7
EIF3E-201ENST00000220849 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
EIF3E-201ENST00000220849 MAP3K7O43318 606 aa10.68□□□□□ -0.7
EIF3E-201ENST00000220849 FAM187AA6NFU0 413 aa10.67□□□□□ -0.7
EIF3E-201ENST00000220849 GTPBP6O43824 516 aaPredicted RBP10.67□□□□□ -0.7
EIF3E-201ENST00000220849 COPS2P61201 443 aa10.67□□□□□ -0.7
EIF3E-201ENST00000220849 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
EIF3E-201ENST00000220849 RNF223E7ERA6 249 aa10.66□□□□□ -0.7
EIF3E-201ENST00000220849 ZPR1O75312 459 aa10.66□□□□□ -0.7
EIF3E-201ENST00000220849 RNF40O75150 1001 aa10.65□□□□□ -0.7
EIF3E-201ENST00000220849 NBR1Q14596 966 aa10.65□□□□□ -0.7
EIF3E-201ENST00000220849 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
EIF3E-201ENST00000220849 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
EIF3E-201ENST00000220849 LOC100996750A0A140TA64 210 aa10.63□□□□□ -0.71
EIF3E-201ENST00000220849 KRTAP4-6Q9BYQ5 205 aa10.63□□□□□ -0.71
EIF3E-201ENST00000220849 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
EIF3E-201ENST00000220849 GDF9O60383 454 aa10.63□□□□□ -0.71
EIF3E-201ENST00000220849 WFS1O76024 890 aa10.63□□□□□ -0.71
EIF3E-201ENST00000220849 WIPF1O43516 503 aa10.62□□□□□ -0.71
EIF3E-201ENST00000220849 ST8SIA5O15466 376 aa10.61□□□□□ -0.71
EIF3E-201ENST00000220849 ZNF697Q5TEC3 545 aa10.6□□□□□ -0.71
EIF3E-201ENST00000220849 INSM1Q01101 510 aaPredicted RBP10.59□□□□□ -0.71
EIF3E-201ENST00000220849 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
EIF3E-201ENST00000220849 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
EIF3E-201ENST00000220849 LIAT1Q6ZQX7 453 aa10.58□□□□□ -0.72
EIF3E-201ENST00000220849 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms