RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Topbp1Q6ZQF0 1515 aa21.51■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Naip5Q9R016 1403 aa21.5■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Plch2A2AP18 1501 aa21.5■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Abca17E9PX95 1733 aa21.49■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Bcl9Q9D219 1425 aa21.49■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Gm13697A2AK42 830 aa21.48■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Zbtb7cQ8VCZ7 619 aa21.48■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Arhgap23Q69ZH9 1483 aa21.46■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Cabp1Q9JLK7 227 aa21.45■■□□□ 1.03
Ldb3-207ENSMUST00000227819 Spag9Q58A65 1321 aaKnown RBP21.45■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Ltbp4Q8K4G1 1666 aa21.45■■□□□ 1.02
Ldb3-207ENSMUST00000227819 3425401B19RikD3Z1D3 1412 aa21.45■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Usp54Q8BL06 1588 aaKnown RBP21.43■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Med14A2ABV5 1459 aaKnown RBP21.43■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Rsph4aQ8BYM7 716 aa21.43■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Adgrb2Q8CGM1 1561 aa21.42■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Chic2Q9D9G3 165 aa21.41■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Ncoa1P70365 1447 aa21.41■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Adgrl2Q8JZZ7 1487 aa21.41■■□□□ 1.02
Ldb3-207ENSMUST00000227819 Ssh2Q5SW75 1423 aa21.39■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Phlpp1Q8CHE4 1687 aa21.36■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Abcc6Q9R1S7 1498 aa21.35■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Rimbp3Q3V0F0 1606 aa21.35■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Myo5cE9Q1F5 1742 aa21.35■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Il16O54824 1322 aa21.34■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Kdm3bQ6ZPY7 1562 aa21.34■■□□□ 1.01
Ldb3-207ENSMUST00000227819 GphnQ8BUV3 769 aaKnown RBP21.33■■□□□ 1.01
Ldb3-207ENSMUST00000227819 ShprhQ7TPQ3 1674 aa21.33■■□□□ 1.01
Ldb3-207ENSMUST00000227819 Prex1Q69ZK0 1650 aa21.33■■□□□ 1
Ldb3-207ENSMUST00000227819 Ecm2Q5FW85 670 aa21.32■■□□□ 1
Ldb3-207ENSMUST00000227819 Hfm1D3Z4R1 1434 aa21.31■■□□□ 1
Ldb3-207ENSMUST00000227819 Hnrnpul2Q00PI9 745 aaKnown RBP21.31■■□□□ 1
Ldb3-207ENSMUST00000227819 Vps8Q0P5W1 1427 aa21.31■■□□□ 1
Ldb3-207ENSMUST00000227819 Kif1bQ60575 1816 aaKnown RBP21.28■■□□□ 1
Ldb3-207ENSMUST00000227819 Scaf11E9PZM7 1456 aaKnown RBP21.27■■□□□ 1
Ldb3-207ENSMUST00000227819 Robo2Q7TPD3 1470 aa21.27■□□□□ 0.99
Ldb3-207ENSMUST00000227819 Adamts7Q68SA9 1657 aa21.26■□□□□ 0.99
Ldb3-207ENSMUST00000227819 Rims2Q9EQZ7 1530 aa21.25■□□□□ 0.99
Ldb3-207ENSMUST00000227819 AlkP97793 1621 aa21.24■□□□□ 0.99
Ldb3-207ENSMUST00000227819 Gli3Q61602 1583 aa21.23■□□□□ 0.99
Ldb3-207ENSMUST00000227819 DroshaQ5HZJ0 1373 aaKnown RBP21.22■□□□□ 0.99
Ldb3-207ENSMUST00000227819 Pde4cQ3UEI1 686 aa21.22■□□□□ 0.99
Ldb3-207ENSMUST00000227819 Chd2E9PZM4 1827 aaKnown RBP21.2■□□□□ 0.98
Ldb3-207ENSMUST00000227819 Akap12Q9WTQ5 1684 aa21.19■□□□□ 0.98
Ldb3-207ENSMUST00000227819 Adgrb3Q80ZF8 1522 aa21.18■□□□□ 0.98
Ldb3-207ENSMUST00000227819 Fam50aQ9WV03 339 aaKnown RBP21.17■□□□□ 0.98
Ldb3-207ENSMUST00000227819 Rapgef3Q8VCC8 918 aa21.16■□□□□ 0.98
Ldb3-207ENSMUST00000227819 Arid4bA2CG63 1314 aaKnown RBP21.14■□□□□ 0.98
Ldb3-207ENSMUST00000227819 NclP09405 707 aaKnown RBP21.13■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Asxl1P59598 1514 aa21.12■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Hspa1lP16627 641 aa21.12■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Fhad1A6PWD2 1420 aa21.11■□□□□ 0.97
Ldb3-207ENSMUST00000227819 UacaQ8CGB3 1411 aa21.11■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Kif13aQ9EQW7 1749 aa21.08■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Tmem131lQ3U3D7 1597 aa21.08■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Iqgap1Q9JKF1 1657 aaKnown RBP21.08■□□□□ 0.97
Ldb3-207ENSMUST00000227819 Ttc21bQ0HA38 1315 aa21.07■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Kdm5aQ3UXZ9 1690 aa21.07■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Gemin5Q8BX17 1502 aaKnown RBP21.07■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Lamc1P02468 1607 aaKnown RBP21.06■□□□□ 0.96
Ldb3-207ENSMUST00000227819 UbtfP25976 765 aaKnown RBP21.06■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Map4P27546 1125 aaKnown RBP21.06■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Rfx7F8VPJ6 1459 aa21.06■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Iqsec2Q5DU25 1478 aa21.06■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Zfp644E9QA22 1323 aa21.05■□□□□ 0.96
Ldb3-207ENSMUST00000227819 PzpQ61838 1495 aa21.05■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Nup155Q99P88 1391 aaKnown RBP21.04■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Tubgcp6G5E8P0 1769 aa21.04■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Nrxn3Q6P9K9 1571 aa21.03■□□□□ 0.96
Ldb3-207ENSMUST00000227819 AnkarA2RT91 1465 aa21.03■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Itsn1Q9Z0R4 1714 aa21.03■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Skint5A7XUY5 1461 aa21.02■□□□□ 0.96
Ldb3-207ENSMUST00000227819 Ylpm1Q9R0I7 1386 aaKnown RBP21.01■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Clstn2Q9ER65 966 aa21.01■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Zc3h13E9Q784 1729 aaKnown RBP21■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Txndc2Q6P902 515 aa21■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Bcl11bQ99PV8 884 aa20.99■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Ino80Q6ZPV2 1559 aa20.99■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Prdm2A2A7B5 1709 aaKnown RBP20.98■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Myom3A2ABU4 1439 aa20.98■□□□□ 0.95
Ldb3-207ENSMUST00000227819 Naip7Q9JIB3 1402 aa20.95■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Eif2ak4Q9QZ05 1648 aa20.95■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Erich6D3Z6S9 713 aa20.94■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Med1Q925J9 1575 aa20.93■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Nsd2Q8BVE8 1365 aa20.93■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Ube2uB1AUC4 352 aa20.92■□□□□ 0.94
Ldb3-207ENSMUST00000227819 P3h3Q8CG70 732 aa20.92■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Efcab6Q6P1E8 1516 aa20.91■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Cd109Q8R422 1442 aa20.91■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Ttll5Q8CHB8 1328 aa20.9■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Gm13695A2AK44 830 aa20.9■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Setd1aE9PYH6 1716 aa20.89■□□□□ 0.94
Ldb3-207ENSMUST00000227819 Iqgap3F8VQ29 1632 aa20.89■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Myo3aQ8K3H5 1613 aa20.89■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Psme1P97371 249 aa20.86■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Tecpr2Q3UH45 1423 aa20.85■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Stk24Q99KH8 431 aa20.85■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Tarbp1E9Q368 1579 aa20.84■□□□□ 0.93
Ldb3-207ENSMUST00000227819 Uggt1Q6P5E4 1551 aa20.82■□□□□ 0.92
Ldb3-207ENSMUST00000227819 IghaA0A0A6YXW6 389 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms