RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Fn1-208	ENSMUST00000186940	Chic2	Q9D9G3	165 aa		33.09	■■■□□ 2.89
Fn1-208	ENSMUST00000186940	Topbp1	Q6ZQF0	1515 aa		33.06	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Naip5	Q9R016	1403 aa		33.06	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Knl1	Q66JQ7	1612 aa		33.04	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Bcl9	Q9D219	1425 aa		33.03	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Gm13697	A2AK42	830 aa		33.02	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Rictor	Q6QI06	1708 aa		33.01	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Zbtb7c	Q8VCZ7	619 aa		33.01	■■■□□ 2.88
Fn1-208	ENSMUST00000186940	Topaz1	E5FYH1	1653 aa		32.98	■■■□□ 2.87
Fn1-208	ENSMUST00000186940	Abca17	E9PX95	1733 aa		32.98	■■■□□ 2.87
Fn1-208	ENSMUST00000186940	Adgrb2	Q8CGM1	1561 aa		32.98	■■■□□ 2.87
Fn1-208	ENSMUST00000186940	Ssh2	Q5SW75	1423 aa		32.96	■■■□□ 2.87
Fn1-208	ENSMUST00000186940	Dip2a	Q8BWT5	1523 aa		32.96	■■■□□ 2.87
Fn1-208	ENSMUST00000186940	Kdm3b	Q6ZPY7	1562 aa		32.95	■■■□□ 2.86
Fn1-208	ENSMUST00000186940	Usp54	Q8BL06	1588 aa	Known RBP	32.94	■■■□□ 2.86
Fn1-208	ENSMUST00000186940	Med14	A2ABV5	1459 aa	Known RBP	32.93	■■■□□ 2.86
Fn1-208	ENSMUST00000186940	Arhgap23	Q69ZH9	1483 aa		32.91	■■■□□ 2.86
Fn1-208	ENSMUST00000186940	Scn4a	Q9ER60	1841 aa		32.88	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Ncl	P09405	707 aa	Known RBP	32.88	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Hnrnpul2	Q00PI9	745 aa	Known RBP	32.88	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Vps8	Q0P5W1	1427 aa		32.88	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Gphn	Q8BUV3	769 aa	Known RBP	32.85	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Pip4k2b	Q80XI4	416 aa		32.84	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Fam50a	Q9WV03	339 aa	Known RBP	32.83	■■■□□ 2.85
Fn1-208	ENSMUST00000186940	Hfm1	D3Z4R1	1434 aa		32.81	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Pde4c	Q3UEI1	686 aa		32.81	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Uaca	Q8CGB3	1411 aa		32.81	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Abcc6	Q9R1S7	1498 aa		32.78	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Ubtf	P25976	765 aa	Known RBP	32.78	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Shprh	Q7TPQ3	1674 aa		32.76	■■■□□ 2.84
Fn1-208	ENSMUST00000186940	Fbxo41	Q6NS60	873 aa		32.75	■■■□□ 2.83
Fn1-208	ENSMUST00000186940	Ncoa1	P70365	1447 aa		32.72	■■■□□ 2.83
Fn1-208	ENSMUST00000186940	Myo5c	E9Q1F5	1742 aa		32.71	■■■□□ 2.83
Fn1-208	ENSMUST00000186940	Clstn2	Q9ER65	966 aa		32.7	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Kif1b	Q60575	1816 aa	Known RBP	32.7	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Adamts7	Q68SA9	1657 aa		32.69	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Prex1	Q69ZK0	1650 aa		32.69	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Rfx7	F8VPJ6	1459 aa		32.69	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Ltbp4	Q8K4G1	1666 aa		32.64	■■■□□ 2.82
Fn1-208	ENSMUST00000186940	Robo2	Q7TPD3	1470 aa		32.62	■■■□□ 2.81
Fn1-208	ENSMUST00000186940	Rimbp3	Q3V0F0	1606 aa		32.61	■■■□□ 2.81
Fn1-208	ENSMUST00000186940	Map4	P27546	1125 aa	Known RBP	32.6	■■■□□ 2.81
Fn1-208	ENSMUST00000186940	Nup155	Q99P88	1391 aa	Known RBP	32.6	■■■□□ 2.81
Fn1-208	ENSMUST00000186940	Fhad1	A6PWD2	1420 aa		32.57	■■■□□ 2.8
Fn1-208	ENSMUST00000186940	Ttc21b	Q0HA38	1315 aa		32.56	■■■□□ 2.8
Fn1-208	ENSMUST00000186940	Scaf11	E9PZM7	1456 aa	Known RBP	32.56	■■■□□ 2.8
Fn1-208	ENSMUST00000186940	Phlpp1	Q8CHE4	1687 aa		32.53	■■■□□ 2.8
Fn1-208	ENSMUST00000186940	Drosha	Q5HZJ0	1373 aa	Known RBP	32.53	■■■□□ 2.8
Fn1-208	ENSMUST00000186940	Ylpm1	Q9R0I7	1386 aa	Known RBP	32.5	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Adgrb3	Q80ZF8	1522 aa		32.5	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Zfp644	E9QA22	1323 aa		32.5	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Alk	P97793	1621 aa		32.49	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Rims2	Q9EQZ7	1530 aa		32.48	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Arid4b	A2CG63	1314 aa	Known RBP	32.48	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Akap12	Q9WTQ5	1684 aa		32.48	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Mia2	Q91ZV0	1396 aa		32.46	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Ube2u	B1AUC4	352 aa		32.45	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Rapgef3	Q8VCC8	918 aa		32.45	■■■□□ 2.79
Fn1-208	ENSMUST00000186940	Chd2	E9PZM4	1827 aa	Known RBP	32.44	■■■□□ 2.78
Fn1-208	ENSMUST00000186940	Nsd2	Q8BVE8	1365 aa		32.43	■■■□□ 2.78
Fn1-208	ENSMUST00000186940	Myom3	A2ABU4	1439 aa		32.43	■■■□□ 2.78
Fn1-208	ENSMUST00000186940	Ankar	A2RT91	1465 aa		32.43	■■■□□ 2.78
Fn1-208	ENSMUST00000186940	Tmem131l	Q3U3D7	1597 aa		32.41	■■■□□ 2.78
Fn1-208	ENSMUST00000186940	Kdm5a	Q3UXZ9	1690 aa		32.38	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Skint5	A7XUY5	1461 aa		32.38	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Asxl1	P59598	1514 aa		32.36	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Ttll5	Q8CHB8	1328 aa		32.35	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Lamc1	P02468	1607 aa	Known RBP	32.34	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Txndc2	Q6P902	515 aa		32.32	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Cd109	Q8R422	1442 aa		32.32	■■■□□ 2.77
Fn1-208	ENSMUST00000186940	Erich6	D3Z6S9	713 aa		32.29	■■■□□ 2.76
Fn1-208	ENSMUST00000186940	Gli3	Q61602	1583 aa		32.29	■■■□□ 2.76
Fn1-208	ENSMUST00000186940	Ino80	Q6ZPV2	1559 aa		32.26	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Pzp	Q61838	1495 aa		32.25	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Efcab6	Q6P1E8	1516 aa		32.24	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Trak1	Q6PD31	939 aa		32.24	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Ptprg	Q05909	1442 aa		32.23	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Ecm2	Q5FW85	670 aa		32.22	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Kif13a	Q9EQW7	1749 aa		32.22	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Itsn1	Q9Z0R4	1714 aa		32.22	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Nrxn3	Q6P9K9	1571 aa		32.22	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Naip7	Q9JIB3	1402 aa		32.22	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Tecpr2	Q3UH45	1423 aa		32.21	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Iqgap1	Q9JKF1	1657 aa	Known RBP	32.21	■■■□□ 2.75
Fn1-208	ENSMUST00000186940	Gemin5	Q8BX17	1502 aa	Known RBP	32.19	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Tarbp1	E9Q368	1579 aa		32.19	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Gm13695	A2AK44	830 aa		32.18	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Hspa1l	P16627	641 aa		32.18	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	P3h3	Q8CG70	732 aa		32.17	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Stk24	Q99KH8	431 aa		32.17	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Iqsec2	Q5DU25	1478 aa		32.17	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Psme1	P97371	249 aa		32.15	■■■□□ 2.74
Fn1-208	ENSMUST00000186940	Iqgap3	F8VQ29	1632 aa		32.12	■■■□□ 2.73
Fn1-208	ENSMUST00000186940	Uggt1	Q6P5E4	1551 aa		32.12	■■■□□ 2.73
Fn1-208	ENSMUST00000186940	Lmtk3	Q5XJV6	1424 aa		32.1	■■■□□ 2.73
Fn1-208	ENSMUST00000186940	Atp7a	Q64430	1491 aa		32.09	■■■□□ 2.73
Fn1-208	ENSMUST00000186940	Med1	Q925J9	1575 aa		32.07	■■■□□ 2.72
Fn1-208	ENSMUST00000186940	Erbin	Q80TH2	1402 aa		32.05	■■■□□ 2.72
Fn1-208	ENSMUST00000186940	Prrc2b	Q7TPM1	1486 aa	Known RBP	32.05	■■■□□ 2.72
Fn1-208	ENSMUST00000186940	Tubgcp6	G5E8P0	1769 aa		32.02	■■■□□ 2.72

Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms