RNA–Protein interactions for RNA: ENSMUST00000111980.3

Hoxd4-202, Transcript of Homeobox protein Hox-D4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd4, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4-202ENSMUST00000111980 Ssh2Q5SW75 1423 aa30.08■■■□□ 2.41
Hoxd4-202ENSMUST00000111980 Ahdc1Q6PAL7 1594 aaKnown RBP30.05■■■□□ 2.4
Hoxd4-202ENSMUST00000111980 Usp54Q8BL06 1588 aaKnown RBP30.05■■■□□ 2.4
Hoxd4-202ENSMUST00000111980 CltcQ68FD5 1675 aaKnown RBP30.05■■■□□ 2.4
Hoxd4-202ENSMUST00000111980 Ercc6l2Q9JIM3 1537 aa30.03■■■□□ 2.4
Hoxd4-202ENSMUST00000111980 Naip5Q9R016 1403 aa30.02■■■□□ 2.4
Hoxd4-202ENSMUST00000111980 RictorQ6QI06 1708 aa30.01■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 Dip2bQ3UH60 1574 aa30.01■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 Fam50aQ9WV03 339 aaKnown RBP30■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 4930407I10RikD3Z5T8 1512 aa30■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 UacaQ8CGB3 1411 aa29.99■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 Zbtb7cQ8VCZ7 619 aa29.99■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 Knl1Q66JQ7 1612 aa29.96■■■□□ 2.39
Hoxd4-202ENSMUST00000111980 Vps8Q0P5W1 1427 aa29.95■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 ShprhQ7TPQ3 1674 aa29.94■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 Rfx7F8VPJ6 1459 aa29.93■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 Rsph4aQ8BYM7 716 aa29.91■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 Arhgap23Q69ZH9 1483 aa29.9■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 Myo5cE9Q1F5 1742 aa29.89■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 NclP09405 707 aaKnown RBP29.89■■■□□ 2.38
Hoxd4-202ENSMUST00000111980 Topaz1E5FYH1 1653 aa29.86■■■□□ 2.37
Hoxd4-202ENSMUST00000111980 Kif1bQ60575 1816 aaKnown RBP29.84■■■□□ 2.37
Hoxd4-202ENSMUST00000111980 Prex1Q69ZK0 1650 aa29.83■■■□□ 2.37
Hoxd4-202ENSMUST00000111980 Med14A2ABV5 1459 aaKnown RBP29.82■■■□□ 2.36
Hoxd4-202ENSMUST00000111980 Hnrnpul2Q00PI9 745 aaKnown RBP29.8■■■□□ 2.36
Hoxd4-202ENSMUST00000111980 Pde4cQ3UEI1 686 aa29.8■■■□□ 2.36
Hoxd4-202ENSMUST00000111980 AlkP97793 1621 aa29.79■■■□□ 2.36
Hoxd4-202ENSMUST00000111980 Bcl9Q9D219 1425 aa29.79■■■□□ 2.36
Hoxd4-202ENSMUST00000111980 Ehmt2Q9Z148 1263 aaKnown RBP29.75■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Adamts7Q68SA9 1657 aa29.75■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Gm13697A2AK42 830 aa29.74■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Hfm1D3Z4R1 1434 aa29.74■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Zfp644E9QA22 1323 aa29.74■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Scn4aQ9ER60 1841 aa29.72■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Mia2Q91ZV0 1396 aa29.72■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Nup155Q99P88 1391 aaKnown RBP29.71■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Dip2aQ8BWT5 1523 aa29.7■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Abcc6Q9R1S7 1498 aa29.7■■■□□ 2.35
Hoxd4-202ENSMUST00000111980 Robo2Q7TPD3 1470 aa29.69■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Asxl1P59598 1514 aa29.69■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Map4P27546 1125 aaKnown RBP29.68■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Tmem131lQ3U3D7 1597 aa29.66■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Fhad1A6PWD2 1420 aa29.65■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Clstn2Q9ER65 966 aa29.65■■■□□ 2.34
Hoxd4-202ENSMUST00000111980 Akap12Q9WTQ5 1684 aa29.6■■■□□ 2.33
Hoxd4-202ENSMUST00000111980 AnkarA2RT91 1465 aa29.58■■■□□ 2.33
Hoxd4-202ENSMUST00000111980 Ttc21bQ0HA38 1315 aa29.57■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Ylpm1Q9R0I7 1386 aaKnown RBP29.57■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Ube2uB1AUC4 352 aa29.56■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Adgrb3Q80ZF8 1522 aa29.56■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Ttll5Q8CHB8 1328 aa29.55■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Myom3A2ABU4 1439 aa29.54■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 GphnQ8BUV3 769 aaKnown RBP29.52■■■□□ 2.32
Hoxd4-202ENSMUST00000111980 Nsd2Q8BVE8 1365 aa29.5■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Rimbp3Q3V0F0 1606 aa29.5■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Ncoa1P70365 1447 aa29.48■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Cd109Q8R422 1442 aa29.48■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Chd2E9PZM4 1827 aaKnown RBP29.48■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Ltbp4Q8K4G1 1666 aa29.47■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Lamc1P02468 1607 aaKnown RBP29.47■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Phlpp1Q8CHE4 1687 aa29.46■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Ino80Q6ZPV2 1559 aa29.45■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 PtprgQ05909 1442 aa29.45■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Pip4k2bQ80XI4 416 aa29.45■■■□□ 2.31
Hoxd4-202ENSMUST00000111980 Skint5A7XUY5 1461 aa29.42■■■□□ 2.3
Hoxd4-202ENSMUST00000111980 Kdm5aQ3UXZ9 1690 aa29.41■■■□□ 2.3
Hoxd4-202ENSMUST00000111980 Trak1Q6PD31 939 aa29.41■■■□□ 2.3
Hoxd4-202ENSMUST00000111980 Scaf11E9PZM7 1456 aaKnown RBP29.4■■■□□ 2.3
Hoxd4-202ENSMUST00000111980 DroshaQ5HZJ0 1373 aaKnown RBP29.39■■■□□ 2.3
Hoxd4-202ENSMUST00000111980 Kif13aQ9EQW7 1749 aa29.38■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Prdm2A2A7B5 1709 aaKnown RBP29.37■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Itsn1Q9Z0R4 1714 aa29.37■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Rims2Q9EQZ7 1530 aa29.37■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Iqgap3F8VQ29 1632 aa29.37■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Tarbp1E9Q368 1579 aa29.35■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Tecpr2Q3UH45 1423 aa29.35■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Atp7aQ64430 1491 aa29.33■■■□□ 2.29
Hoxd4-202ENSMUST00000111980 Erich6D3Z6S9 713 aa29.32■■■□□ 2.28
Hoxd4-202ENSMUST00000111980 Efcab6Q6P1E8 1516 aa29.31■■■□□ 2.28
Hoxd4-202ENSMUST00000111980 Mphosph9A6H5Y1 991 aa29.28■■■□□ 2.28
Hoxd4-202ENSMUST00000111980 Naip7Q9JIB3 1402 aa29.27■■■□□ 2.28
Hoxd4-202ENSMUST00000111980 Uggt1Q6P5E4 1551 aa29.26■■■□□ 2.28
Hoxd4-202ENSMUST00000111980 Arid4bA2CG63 1314 aaKnown RBP29.26■■■□□ 2.27
Hoxd4-202ENSMUST00000111980 Kif21bQ9QXL1 1668 aa29.26■■■□□ 2.27
Hoxd4-202ENSMUST00000111980 Edc4Q3UJB9 1406 aaKnown RBP29.21■■■□□ 2.27
Hoxd4-202ENSMUST00000111980 Stk24Q99KH8 431 aa29.21■■■□□ 2.27
Hoxd4-202ENSMUST00000111980 Txndc2Q6P902 515 aa29.18■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Abca8aQ8K442 1620 aa29.18■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Pik3c2gO70167 1506 aa29.18■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Dhx9O70133 1380 aaKnown RBP29.17■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 ErbinQ80TH2 1402 aa29.17■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Gemin5Q8BX17 1502 aaKnown RBP29.16■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Eif2ak4Q9QZ05 1648 aa29.16■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Rapgef3Q8VCC8 918 aa29.16■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Iqgap1Q9JKF1 1657 aaKnown RBP29.16■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Sall3Q62255 1320 aa29.15■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Gli3Q61602 1583 aa29.14■■■□□ 2.26
Hoxd4-202ENSMUST00000111980 Mroh1E0CZ22 1640 aa29.14■■■□□ 2.25
Hoxd4-202ENSMUST00000111980 Prrc2bQ7TPM1 1486 aaKnown RBP29.13■■■□□ 2.25
Hoxd4-202ENSMUST00000111980 Ehbp1l1Q99MS7 1716 aa29.12■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms