RNA–Protein interactions for RNA: ENSMUST00000106961.1

Cdc27-202, Transcript of Cell division cycle protein 27 homolog, mousemouse

TSL 1 (best) BASIC

Gene Cdc27, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc27-202ENSMUST00000106961 Ube2uB1AUC4 352 aa23.66■■□□□ 1.38
Cdc27-202ENSMUST00000106961 Lamc1P02468 1607 aaKnown RBP23.66■■□□□ 1.38
Cdc27-202ENSMUST00000106961 Mphosph9A6H5Y1 991 aa23.65■■□□□ 1.38
Cdc27-202ENSMUST00000106961 Hspa5P20029 655 aaKnown RBP23.64■■□□□ 1.38
Cdc27-202ENSMUST00000106961 Abca6Q8K441 1624 aa23.64■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Adgrb2Q8CGM1 1561 aa23.63■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Trpm1Q2TV84 1622 aa23.61■■□□□ 1.37
Cdc27-202ENSMUST00000106961 AlkP97793 1621 aa23.61■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Map3k5O35099 1380 aa23.6■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Talpid3E9PV87 1520 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Fmn2Q9JL04 1578 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Kif21bQ9QXL1 1668 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Afap1Q80YS6 731 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Naip5Q9R016 1403 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Cdc42bpgQ80UW5 1551 aa23.59■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Myom2Q14BI5 1463 aa23.58■■□□□ 1.37
Cdc27-202ENSMUST00000106961 Scn4aQ9ER60 1841 aa23.58■■□□□ 1.36
Cdc27-202ENSMUST00000106961 4930407I10RikD3Z5T8 1512 aa23.58■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Adgrl2Q8JZZ7 1487 aa23.54■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Mast1Q9R1L5 1570 aa23.53■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Trpm2Q91YD4 1506 aa23.53■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Dip2bQ3UH60 1574 aa23.52■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Zfp644E9QA22 1323 aa23.52■■□□□ 1.36
Cdc27-202ENSMUST00000106961 Topaz1E5FYH1 1653 aa23.51■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Nos1Q9Z0J4 1429 aa23.51■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Xrn1P97789 1719 aaKnown RBP23.5■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Gli2Q0VGT2 1544 aa23.49■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Rprd2Q6NXI6 1469 aaKnown RBP23.48■■□□□ 1.35
Cdc27-202ENSMUST00000106961 CltcQ68FD5 1675 aaKnown RBP23.47■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Naip6Q9JIB6 1403 aa23.47■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Dip2aQ8BWT5 1523 aa23.46■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Pkd2O35245 966 aa23.46■■□□□ 1.35
Cdc27-202ENSMUST00000106961 Pik3c2gO70167 1506 aa23.45■■□□□ 1.34
Cdc27-202ENSMUST00000106961 Fbxo41Q6NS60 873 aa23.45■■□□□ 1.34
Cdc27-202ENSMUST00000106961 RictorQ6QI06 1708 aa23.42■■□□□ 1.34
Cdc27-202ENSMUST00000106961 Gm13697A2AK42 830 aa23.41■■□□□ 1.34
Cdc27-202ENSMUST00000106961 Usp47Q8BY87 1376 aa23.39■■□□□ 1.34
Cdc27-202ENSMUST00000106961 Nup155Q99P88 1391 aaKnown RBP23.39■■□□□ 1.34
Cdc27-202ENSMUST00000106961 Znf518aB2RRF6 1478 aaKnown RBP23.38■■□□□ 1.33
Cdc27-202ENSMUST00000106961 DroshaQ5HZJ0 1373 aaKnown RBP23.37■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Ttll5Q8CHB8 1328 aa23.37■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Rrp7aQ9D1C9 280 aaKnown RBP23.36■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Knl1Q66JQ7 1612 aa23.35■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Ppargc1bQ8VHJ7 1014 aa23.35■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Ssh2Q5SW75 1423 aa23.33■■□□□ 1.33
Cdc27-202ENSMUST00000106961 Pip4k2bQ80XI4 416 aa23.32■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Prdm16A2A935 1275 aa23.3■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Kif3bQ61771 747 aa23.3■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Ltbp4Q8K4G1 1666 aa23.3■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Uggt2E9Q4X2 1504 aa23.3■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Clstn2Q9ER65 966 aa23.3■■□□□ 1.32
Cdc27-202ENSMUST00000106961 PtprgQ05909 1442 aa23.29■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Map4P27546 1125 aaKnown RBP23.28■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Topbp1Q6ZQF0 1515 aa23.28■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Abca17E9PX95 1733 aa23.28■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Bcl9Q9D219 1425 aa23.27■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Dhx9O70133 1380 aaKnown RBP23.27■■□□□ 1.32
Cdc27-202ENSMUST00000106961 Trak1Q6PD31 939 aa23.26■■□□□ 1.31
Cdc27-202ENSMUST00000106961 Arhgap23Q69ZH9 1483 aa23.25■■□□□ 1.31
Cdc27-202ENSMUST00000106961 Med14A2ABV5 1459 aaKnown RBP23.23■■□□□ 1.31
Cdc27-202ENSMUST00000106961 Plch2A2AP18 1501 aa23.22■■□□□ 1.31
Cdc27-202ENSMUST00000106961 Ncoa1P70365 1447 aa23.2■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Asxl1P59598 1514 aa23.2■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Nop58Q6DFW4 536 aaKnown RBP23.19■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Mbd5B1AYB6 1498 aa23.19■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Usp54Q8BL06 1588 aaKnown RBP23.18■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Zbtb7cQ8VCZ7 619 aa23.17■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Phlpp1Q8CHE4 1687 aa23.16■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Spag9Q58A65 1321 aaKnown RBP23.16■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Robo2Q7TPD3 1470 aa23.15■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Rimbp3Q3V0F0 1606 aa23.14■■□□□ 1.3
Cdc27-202ENSMUST00000106961 Rock1P70335 1354 aa23.13■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Dot1lQ6XZL8 1540 aa23.13■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Ecm2Q5FW85 670 aa23.12■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Cd109Q8R422 1442 aa23.11■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Neurod1Q60867 357 aa23.11■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Myo5cE9Q1F5 1742 aa23.11■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Rsph4aQ8BYM7 716 aa23.1■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Abcc6Q9R1S7 1498 aa23.09■■□□□ 1.29
Cdc27-202ENSMUST00000106961 ShprhQ7TPQ3 1674 aa23.09■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Prex1Q69ZK0 1650 aa23.08■■□□□ 1.29
Cdc27-202ENSMUST00000106961 Ppip5k1A2ARP1 1436 aa23.08■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Kif1bQ60575 1816 aaKnown RBP23.07■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Atp7aQ64430 1491 aa23.07■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Sin3aQ60520 1274 aaKnown RBP23.06■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Scaf11E9PZM7 1456 aaKnown RBP23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Myom3A2ABU4 1439 aa23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Rgl3Q3UYI5 709 aa23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 GphnQ8BUV3 769 aaKnown RBP23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Gli3Q61602 1583 aa23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Mug2P28666 1451 aa23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Cpsf1Q9EPU4 1441 aaKnown RBP23.05■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Hfm1D3Z4R1 1434 aa23.04■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Pde4cQ3UEI1 686 aa23.04■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Iqgap1Q9JKF1 1657 aaKnown RBP23.02■■□□□ 1.28
Cdc27-202ENSMUST00000106961 Nsd2Q8BVE8 1365 aa23.01■■□□□ 1.27
Cdc27-202ENSMUST00000106961 Dapk1Q80YE7 1442 aa23■■□□□ 1.27
Cdc27-202ENSMUST00000106961 Adamts7Q68SA9 1657 aa23■■□□□ 1.27
Cdc27-202ENSMUST00000106961 Rims2Q9EQZ7 1530 aa23■■□□□ 1.27
Cdc27-202ENSMUST00000106961 Chd2E9PZM4 1827 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms