RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 YME1L1Q96TA2 773 aa15.9■□□□□ 0.14
SDHD-209ENST00000640554 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
SDHD-209ENST00000640554 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
SDHD-209ENST00000640554 RGS18Q9NS28 235 aa15.9■□□□□ 0.14
SDHD-209ENST00000640554 DENND3A2RUS2 1198 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
SDHD-209ENST00000640554 SLC26A4O43511 780 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 MYOGP15173 224 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 RARRES1P49788 294 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 TAP1Q03518 808 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 NBR1Q14596 966 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 EMC2Q15006 297 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 KRT79Q5XKE5 535 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 RTN4RL1Q86UN2 441 aaPredicted RBP15.89■□□□□ 0.13
SDHD-209ENST00000640554 FAM228AQ86W67 206 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 RHPN2Q8IUC4 686 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 NPAS4Q8IUM7 802 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 MCPH1Q8NEM0 835 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 TMEM40Q8WWA1 233 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 MTRQ99707 1265 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 SH2D3AQ9BRG2 576 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
SDHD-209ENST00000640554 ATP6V0A4Q9HBG4 840 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
SDHD-209ENST00000640554 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.13
SDHD-209ENST00000640554 ZBTB39O15060 712 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 MED24O75448 989 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 UPP2O95045 317 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 HSP90AA1P07900 732 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 SFPQP23246 707 aaKnown RBP eCLIP15.88■□□□□ 0.13
SDHD-209ENST00000640554 CCT6AP40227 531 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 ERVK-21P61565 698 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 FAM189BP81408 668 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 DRP2Q13474 957 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 TFDP1Q14186 410 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 FAM117BQ6P1L5 589 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 SRGAP1Q7Z6B7 1085 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 PIGOQ8TEQ8 1089 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 PRPF31Q8WWY3 499 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 AK8Q96MA6 479 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 TGS1Q96RS0 853 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 ADAM2Q99965 735 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 TMX1Q9H3N1 280 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 ELAC1Q9H777 363 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 LRFN2Q9ULH4 789 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 RWDD3Q9Y3V2 267 aa15.88■□□□□ 0.13
SDHD-209ENST00000640554 LAMA2P24043 3122 aaKnown RBP15.88■□□□□ 0.13
SDHD-209ENST00000640554 A0A087WZ62 844 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 FOSL2P15408 326 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 POU3F3P20264 500 aaPredicted RBP15.87■□□□□ 0.13
SDHD-209ENST00000640554 LAMTOR4Q0VGL1 99 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 DSC3Q14574 896 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 CRIPAKQ8N1N5 446 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 PPP1R16BQ96T49 567 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 FDXACB1Q9BRP7 624 aaPredicted RBP15.87■□□□□ 0.13
SDHD-209ENST00000640554 DNM3Q9UQ16 869 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 PCDHB7Q9Y5E2 793 aa15.87■□□□□ 0.13
SDHD-209ENST00000640554 SZT2Q5T011 3432 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 LINC01553A4QN01 128 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 ARHGEF35A5YM69 484 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 C9IYK1 514 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 HOXA2O43364 376 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 STX6O43752 255 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 DGKIO75912 1065 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 SKIP12755 728 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 ARL2P36404 184 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 PHKA2P46019 1235 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 NCBP1Q09161 790 aaKnown RBP15.86■□□□□ 0.13
SDHD-209ENST00000640554 TMCO2Q7Z6W1 182 aaPredicted RBP15.86■□□□□ 0.13
SDHD-209ENST00000640554 FIBCD1Q8N539 461 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 SNX29Q8TEQ0 813 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 LINC01599Q8WXQ3 324 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 MYLIPQ8WY64 445 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 TMEM143Q96AN5 459 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 ZNF689Q96CS4 500 aaPredicted RBP15.86■□□□□ 0.13
SDHD-209ENST00000640554 TRAIPQ9BWF2 469 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 NT5C3AQ9H0P0 336 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 PRDM12Q9H4Q4 367 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 IFT122Q9HBG6 1241 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 TMEM161AQ9NX61 479 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 LMCD1Q9NZU5 365 aa15.86■□□□□ 0.13
SDHD-209ENST00000640554 LCHNA4D1U4 455 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 EOMESO95936 686 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 RB1P06400 928 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 SRGAP2CP0DJJ0 459 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 CYP11B2P19099 503 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 IFNLR1Q8IU57 520 aaPredicted RBP15.85■□□□□ 0.13
SDHD-209ENST00000640554 CMTR2Q8IYT2 770 aaKnown RBP15.85■□□□□ 0.13
SDHD-209ENST00000640554 NLRP4Q96MN2 994 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 NFKBIZQ9BYH8 718 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 XPNPEP1Q9NQW7 623 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 KIAA1024Q9UPX6 916 aa15.85■□□□□ 0.13
SDHD-209ENST00000640554 A0A0U1RQF3 1178 aa15.84■□□□□ 0.13
SDHD-209ENST00000640554 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
SDHD-209ENST00000640554 MGEA5O60502 916 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms