RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 TMEM40Q8WWA1 233 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 WDR6Q9NNW5 1121 aaKnown RBP12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 SPEGQ15772 3267 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 CARNS1A5YM72 827 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 FAM170BA6NMN3 283 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 LILRB5O75023 590 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 MAGEA9P43362 315 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 N4BP2L1Q5TBK1 243 aaPredicted RBP12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 LAIR1Q6GTX8 287 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 DDX53Q86TM3 631 aaKnown RBP12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 FAM126AQ9BYI3 521 aaPredicted RBP12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 DPP7Q9UHL4 492 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 ZMIZ1Q9ULJ6 1067 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 CLUHO75153 1309 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
PTP4A1-207ENST00000639568 CCDC195A0A1B0GUA6 201 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 LRP3O75074 770 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 ATP9AO75110 1047 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 KCNA2P16389 499 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 KLRC1P26715 233 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 NT5C2P49902 561 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 CLCN4P51793 760 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 SNW1Q13573 536 aaKnown RBP12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 LPAL2Q16609 132 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 KIZQ2M2Z5 673 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 CUL5Q93034 780 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 GPRASP2Q96D09 838 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 MYADMQ96S97 322 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 PPP1R16BQ96T49 567 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTP4A1-207ENST00000639568 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 RETP07949 1114 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 LAMP2P13473 410 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 STAT5BP51692 787 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 NRLP54845 237 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 MTMR1Q13613 665 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 TSSK4Q6SA08 328 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 TBC1D10CQ8IV04 446 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 CMASQ8NFW8 434 aaPredicted RBP12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 HELQQ8TDG4 1101 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 BBXQ8WY36 941 aaPredicted RBP12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 OSMRQ99650 979 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 OSBPL6Q9BZF3 934 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 NEDD4P46934 1319 aa12.6□□□□□ -0.39
PTP4A1-207ENST00000639568 NCAM2O15394 837 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 GPC5P78333 572 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PRKCQQ04759 706 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 DSC3Q14574 896 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PPP2R5DQ14738 602 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PRR23CQ6ZRP0 262 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PRR23BQ6ZRT6 265 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 SMG7Q92540 1137 aaKnown RBP12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 NELL1Q92832 810 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PHKBQ93100 1093 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 IGSF21Q96ID5 467 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PIGSQ96S52 555 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PCYT2Q99447 389 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 JPH1Q9HDC5 661 aaPredicted RBP12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 MAN1C1Q9NR34 630 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 MTF2Q9Y483 593 aaPredicted RBP12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 NUMBLQ9Y6R0 609 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
PTP4A1-207ENST00000639568 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 ZNF213O14771 459 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 CNPP09543 421 aaKnown RBP12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 HTR4Q13639 388 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 MLF2Q15773 248 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms