RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ZFYVE16Q7Z3T8 1539 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 DRP2Q13474 957 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-218ENST00000635120 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 NR3C1P04150 777 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 CCNE1P24864 410 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-218ENST00000635120 AP2B1P63010 937 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 RHOT2Q8IXI1 618 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 KRT38O76015 456 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 NR1H4Q96RI1 486 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-218ENST00000635120 SLITRK6Q9H5Y7 841 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 ABHD10Q9NUJ1 306 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 NFRKBQ6P4R8 1299 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 TET3O43151 1660 aa9.73□□□□□ -0.85
CSMD1-218ENST00000635120 BMP3P12645 472 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ARHGAP27Q6ZUM4 889 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ATP10AO60312 1499 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ACBD5Q5T8D3 534 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 BZW1Q7L1Q6 419 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 FAM49AQ9H0Q0 323 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 SNX24Q9Y343 169 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ARHGEF37A1IGU5 675 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 CALB1P05937 261 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ZNF699Q32M78 642 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 MTRQ99707 1265 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 STX18Q9P2W9 335 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ADAM21Q9UKJ8 722 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 TMCC1O94876 653 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ESRRBO95718 433 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 RBBP7Q16576 425 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 PIGOQ8TEQ8 1089 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 EDEM3Q9BZQ6 932 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 COPS2P61201 443 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 RESTQ13127 1097 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 HEMGNQ9BXL5 484 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 EIF4E1BA6NMX2 242 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 USP14P54578 494 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 SURF1Q15526 300 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 IMPG1Q17R60 797 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ARMCX2Q7L311 632 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 TAGAPQ8N103 731 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 MB21D1Q8N884 522 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ADAM22Q9P0K1 906 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 MYO1CO00159 1063 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 CATSPER3Q86XQ3 398 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 NEUROG2Q9H2A3 272 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 PRPF3O43395 683 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 SNAP25P60880 206 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 PSMC1P62191 440 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 PDCD6IPQ8WUM4 868 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 MMTAG2Q9BU76 263 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ATP6V0A4Q9HBG4 840 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 MXD4Q14582 209 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 TTC8Q8TAM2 541 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ZNF341Q9BYN7 854 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
CSMD1-218ENST00000635120 SLC8A2Q9UPR5 921 aa9.72□□□□□ -0.85
CSMD1-218ENST00000635120 ANKRD65E5RJM6 399 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 EFTUD2Q15029 972 aaKnown RBP eCLIP9.71□□□□□ -0.85
CSMD1-218ENST00000635120 RBM41Q96IZ5 413 aaKnown RBP9.71□□□□□ -0.85
CSMD1-218ENST00000635120 ASPSCR1Q9BZE9 553 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 GDAQ9Y2T3 454 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 ERBB4Q15303 1308 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 PODXLO00592 558 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 PPP2R2AP63151 447 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 CCDC85BQ15834 202 aaPredicted RBP9.71□□□□□ -0.85
CSMD1-218ENST00000635120 OSBPL1AQ9BXW6 950 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 HDAC6Q9UBN7 1215 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 PYGBP11216 843 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 FBXW4P57775 412 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 GPR162Q16538 588 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 CYP26B1Q9NR63 512 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 ARAP3Q8WWN8 1544 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 CIITAP33076 1130 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 CAV1Q03135 178 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 DPY19L2Q6NUT2 758 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 TMEM270Q6UE05 265 aa9.71□□□□□ -0.85
CSMD1-218ENST00000635120 SARS2Q9NP81 518 aaKnown RBP9.71□□□□□ -0.85
CSMD1-218ENST00000635120 CDV3Q9UKY7 258 aaKnown RBP9.71□□□□□ -0.85
CSMD1-218ENST00000635120 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 CCDC188H7C350 402 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 MECOMQ03112 1051 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 WDR75Q8IWA0 830 aaKnown RBP9.71□□□□□ -0.86
CSMD1-218ENST00000635120 OSBPL9Q96SU4 736 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 CCDC90BQ9GZT6 254 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 CEP72Q9P209 647 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 KNL1Q8NG31 2342 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 ACTN3Q08043 901 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-218ENST00000635120 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 PUS7LQ9H0K6 701 aaKnown RBP9.71□□□□□ -0.86
CSMD1-218ENST00000635120 CYP4F11Q9HBI6 524 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 TBX22Q9Y458 520 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 KDM6BO15054 1643 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 OSBPP22059 807 aa9.71□□□□□ -0.86
CSMD1-218ENST00000635120 TERF2Q15554 542 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms