RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ATP8B1O43520 1251 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 CYP2J2P51589 502 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 CKAP4Q07065 602 aaKnown RBP21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 PPP2R5AQ15172 486 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 KRT222Q8N1A0 295 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 INPP4AQ96PE3 977 aaPredicted RBP21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 SENP7Q9BQF6 1050 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 TEX13BQ9BXU2 312 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 ANKEF1Q9NU02 776 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 SALL4Q9UJQ4 1053 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 AFG3L2Q9Y4W6 797 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 A0A087X0T9 212 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 FAM228BP0C875 321 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 PNMA6AP0CW24 399 aaPredicted RBP21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 ZNF746Q6NUN9 644 aaPredicted RBP21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 NLRX1Q86UT6 975 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 RPGRIP1Q96KN7 1286 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 DRC1Q96MC2 740 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 CCDC43Q96MW1 224 aaKnown RBP21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 MAF1Q9H063 256 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 ST6GALNAC4Q9H4F1 302 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 SNX12Q9UMY4 172 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 MYH10P35580 1976 aa21.55■■□□□ 1.04
PCDHB11-202ENST00000624887 MYPNQ86TC9 1320 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 BACH1O14867 736 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 PRLRP16471 622 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 PRKCIP41743 596 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 FMO5P49326 533 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 JAM2P57087 298 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 NOA1Q8NC60 698 aaKnown RBP21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 RBM46Q8TBY0 533 aaKnown RBP21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 NOX5Q96PH1 765 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 MMS19Q96T76 1030 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 ARFGAP3Q9NP61 516 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 ADAMTS1Q9UHI8 967 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 SRCAPQ6ZRS2 3230 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 SEC31AO94979 1220 aaKnown RBP21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 ANKRD13CQ8N6S4 541 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 ACCSQ96QU6 501 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 MOV10L1Q9BXT6 1211 aaKnown RBP21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 ACAD9Q9H845 621 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 HOXC10Q9NYD6 342 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 CYP39A1Q9NYL5 469 aa21.54■■□□□ 1.04
PCDHB11-202ENST00000624887 EXOC3O60645 756 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 PTK2Q05397 1052 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 PLS1Q14651 629 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 SH3D19Q5HYK7 790 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 C12orf56Q8IXR9 622 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 HNRNPLLQ8WVV9 542 aaKnown RBP21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 PNKPQ96T60 521 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 ADARB2Q9NS39 739 aaKnown RBP21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 PCDHA10Q9Y5I2 948 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 KIAA1217Q5T5P2 1943 aa21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 POLR2AP24928 1970 aaKnown RBP21.53■■□□□ 1.04
PCDHB11-202ENST00000624887 TMEM150BA6NC51 233 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 TUBBP07437 444 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 ANXA13P27216 316 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 GTF2BQ00403 316 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 BFSP1Q12934 665 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 NAB2Q15742 525 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 C10orf76Q5T2E6 689 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 ZNF571Q7Z3V5 609 aaPredicted RBP21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 CAPZA3Q96KX2 299 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 SH2D3AQ9BRG2 576 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 AJAP1Q9UKB5 411 aaPredicted RBP21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 WDR90Q96KV7 1748 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 SPDYE16A6NNV3 312 aaPredicted RBP21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 RGS20O76081 388 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 RHOXF2BP0C7M4 288 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 KCNA2P16389 499 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 ENOX2Q16206 610 aaKnown RBP21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 XKR9Q5GH70 373 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 IQCEQ6IPM2 695 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 SLC17A8Q8NDX2 589 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 RHOXF2Q9BQY4 288 aa21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 A1CFQ9NQ94 594 aaKnown RBP21.52■■□□□ 1.04
PCDHB11-202ENST00000624887 WDR81Q562E7 1941 aa21.52■■□□□ 1.03
PCDHB11-202ENST00000624887 ZNF185O15231 689 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 USP2O75604 605 aaPredicted RBP21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 TBC1D8O95759 1140 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 CBWD6Q4V339 395 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 CBWD3Q5JTY5 395 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 CBWD5Q5RIA9 395 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 PLA2G4FQ68DD2 849 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 HAUS6Q7Z4H7 955 aa21.51■■□□□ 1.03
PCDHB11-202ENST00000624887 STAM2O75886 525 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 NCKAP1LP55160 1127 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 NPEPPSP55786 919 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 SNRPFP62306 86 aaKnown RBP21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 KIAA0753Q2KHM9 967 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 GJB7Q6PEY0 223 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 ANO5Q75V66 913 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 CDHR1Q96JP9 859 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 IWS1Q96ST2 819 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 LOC285556D6RIA3 1793 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 NFASCO94856 1347 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 BUB1O43683 1085 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms