RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CLSTN1O94985 981 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 SP2Q02086 613 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 KCTD2Q14681 263 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 HAUS6Q7Z4H7 955 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 FAM133AQ8N9E0 248 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 ZNF526Q8TF50 670 aaPredicted RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 BICD1Q96G01 975 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 CARD6Q9BX69 1037 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 METTL14Q9HCE5 456 aaKnown RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 TXNRD2Q9NNW7 524 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 GCNT4Q9P109 453 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 A0A1W2PQJ5 194 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 GOLGA8IPA6NC78 632 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 GOLGA8JA6NMD2 632 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 MAFGO15525 162 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 ZNF131P52739 623 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 SMTNP53814 917 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 PPIL2Q13356 520 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 LRRN4CLQ8ND94 238 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 ZC3H15Q8WU90 426 aaKnown RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 ACCSQ96QU6 501 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 KMT5AQ9NQR1 393 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 FANCGO15287 622 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 ZNF862O60290 1169 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 KRT13P13646 458 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 Q3C1V9 767 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 FASTKD5Q7L8L6 764 aaKnown RBP10.86□□□□□ -0.67
VTA1-205ENST00000620996 GPATCH11Q8N954 259 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 MMP19Q99542 508 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 MLXIPQ9HAP2 919 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
VTA1-205ENST00000620996 SPATA31C2B4DYI2 1134 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 DKC1O60832 514 aaKnown RBP eCLIP10.86□□□□□ -0.67
VTA1-205ENST00000620996 MARK3P27448 753 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 KIF11P52732 1056 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
VTA1-205ENST00000620996 FIGNQ5HY92 759 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 FOXR2Q6PJQ5 311 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 GBP6Q6ZN66 633 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 IQCDQ96DY2 449 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 FIZ1Q96SL8 496 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 IWS1Q96ST2 819 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 ZNF302Q9NR11 478 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 CEP72Q9P209 647 aa10.86□□□□□ -0.67
VTA1-205ENST00000620996 CCDC66A2RUB6 948 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 CTAGE9A4FU28 777 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SLC16A3O15427 465 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 SNAPC2Q13487 334 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 ELF2Q15723 593 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 ASIC2Q16515 512 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 LY6KQ17RY6 165 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 GJB7Q6PEY0 223 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 ANKRD13CQ8N6S4 541 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 DNERQ8NFT8 737 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 CBWD1Q9BRT8 395 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 IFIH1Q9BYX4 1025 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 ANKEF1Q9NU02 776 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 ARHGAP20Q9P2F6 1191 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 DENND3A2RUS2 1198 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 GGPS1O95749 300 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SUPT20HL2P0C7V6 817 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 FECHP22830 423 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
VTA1-205ENST00000620996 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 KIF5AQ12840 1032 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 MEA1Q16626 185 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 PNMA8AQ86V59 439 aaPredicted RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 GOLGA5Q8TBA6 731 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SAAL1Q96ER3 474 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 ENC1O14682 589 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 KRT86O43790 486 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 STAM2O75886 525 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 LYPLA2O95372 231 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 MATR3P43243 847 aaKnown RBP eCLIP10.85□□□□□ -0.67
VTA1-205ENST00000620996 KLHL30Q0D2K2 578 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 CCDC170Q8IYT3 715 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 RDM1Q8NG50 284 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 BAP1Q92560 729 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 GLG1Q92896 1179 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 SLC35C1Q96A29 364 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 TMEM143Q96AN5 459 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 ERO1AQ96HE7 468 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 IFT74Q96LB3 600 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 POLR3FQ9H1D9 316 aaPredicted RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 PUF60Q9UHX1 559 aaKnown RBP10.85□□□□□ -0.67
VTA1-205ENST00000620996 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 UBE4BO95155 1302 aa10.85□□□□□ -0.67
VTA1-205ENST00000620996 RBBP6Q7Z6E9 1792 aaKnown RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 NOL4O94818 638 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms