RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SPIRE1Q08AE8 756 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 DSC3Q14574 896 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 CYP26B1Q9NR63 512 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 TMEM161AQ9NX61 479 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 PCDHA12Q9UN75 941 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 XIRP2A4UGR9 3374 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 TMEM150BA6NC51 233 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 TFF2Q03403 129 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 CALCRLQ16602 461 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 NCAPH2Q6IBW4 605 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 OTUD6AQ7L8S5 288 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 ZNF410Q86VK4 478 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 NLRP7Q8WX94 980 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 C8orf76Q96K31 380 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 LXNQ9BS40 222 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 GCOM2Q9BZD3 368 aaPredicted RBP20.4■□□□□ 0.86
VCX3A-203ENST00000612369 INO80BQ9C086 356 aaPredicted RBP20.4■□□□□ 0.86
VCX3A-203ENST00000612369 ZSWIM4Q9H7M6 989 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 ATP6V0A4Q9HBG4 840 aa20.4■□□□□ 0.86
VCX3A-203ENST00000612369 SPTBN5Q9NRC6 3674 aaKnown RBP20.4■□□□□ 0.86
VCX3A-203ENST00000612369 MRPL42Q9Y6G3 142 aaKnown RBP20.4■□□□□ 0.86
VCX3A-203ENST00000612369 NEMFO60524 1076 aa20.39■□□□□ 0.85
VCX3A-203ENST00000612369 BMP1P13497 986 aa20.39■□□□□ 0.85
VCX3A-203ENST00000612369 SLC7A3Q8WY07 619 aa20.39■□□□□ 0.85
VCX3A-203ENST00000612369 SH2D3AQ9BRG2 576 aa20.39■□□□□ 0.85
VCX3A-203ENST00000612369 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
VCX3A-203ENST00000612369 SUCLA2Q9P2R7 463 aaPredicted RBP20.39■□□□□ 0.85
VCX3A-203ENST00000612369 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.38■□□□□ 0.85
VCX3A-203ENST00000612369 HOXA2O43364 376 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 YWHABP31946 246 aaKnown RBP20.38■□□□□ 0.85
VCX3A-203ENST00000612369 RFC5P40937 340 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 FOSBP53539 338 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 DRP2Q13474 957 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 RABEP1Q15276 862 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 PAN2Q504Q3 1202 aaKnown RBP20.38■□□□□ 0.85
VCX3A-203ENST00000612369 FAM184AQ8NB25 1140 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 NEK9Q8TD19 979 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 CEP170P1Q96L14 293 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 FOXP1Q9H334 677 aaPredicted RBP20.38■□□□□ 0.85
VCX3A-203ENST00000612369 CHST12Q9NRB3 414 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 DACT1Q9NYF0 836 aa20.38■□□□□ 0.85
VCX3A-203ENST00000612369 NCK2O43639 380 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 GAS2O43903 313 aaKnown RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 SFPQP23246 707 aaKnown RBP eCLIP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 POLGP54098 1239 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 NPEPPSP55786 919 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 ORC2Q13416 577 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 PLA2G4FQ68DD2 849 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 RHPN2Q8IUC4 686 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 DYDC2Q96IM9 177 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 ZNF668Q96K58 619 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 MTMR9Q96QG7 549 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 DHX33Q9H6R0 707 aaKnown RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 UBE2ZQ9H832 354 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 TTC12Q9H892 705 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 AAASQ9NRG9 546 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 RGL1Q9NZL6 768 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 WRAP73Q9P2S5 460 aaPredicted RBP20.37■□□□□ 0.85
VCX3A-203ENST00000612369 PLAGL2Q9UPG8 496 aa20.37■□□□□ 0.85
VCX3A-203ENST00000612369 A0A087WZ62 844 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 TNFRSF10AO00220 468 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 GRM6O15303 877 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 SLITRK3O94933 977 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 LYPLA2O95372 231 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 IBSPP21815 317 aaPredicted RBP20.36■□□□□ 0.85
VCX3A-203ENST00000612369 GATMP50440 423 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 KCNQ1P51787 676 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 FAM102BQ5T8I3 360 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 TPH2Q8IWU9 490 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 TCP11Q8WWU5 503 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 UHRF1Q96T88 793 aaPredicted RBP20.36■□□□□ 0.85
VCX3A-203ENST00000612369 HSD17B14Q9BPX1 270 aa20.36■□□□□ 0.85
VCX3A-203ENST00000612369 EIF2AK1Q9BQI3 630 aaKnown RBP20.36■□□□□ 0.85
VCX3A-203ENST00000612369 FDXACB1Q9BRP7 624 aaPredicted RBP20.36■□□□□ 0.85
VCX3A-203ENST00000612369 FNDC1Q4ZHG4 1894 aaPredicted RBP20.36■□□□□ 0.85
VCX3A-203ENST00000612369 A0A0U1RQF3 1178 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 TBKBP1A7MCY6 615 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 ST18O60284 1047 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 EOMESO95936 686 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 TXKP42681 527 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 CYP4A11Q02928 519 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 CTTNQ14247 550 aaKnown RBP20.35■□□□□ 0.85
VCX3A-203ENST00000612369 CSPP1Q1MSJ5 1256 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 ECHDC2Q86YB7 292 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 TRAIPQ9BWF2 469 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 TMEM117Q9H0C3 514 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 PCDHB12Q9Y5F1 795 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 COL4A3BPQ9Y5P4 624 aa20.35■□□□□ 0.85
VCX3A-203ENST00000612369 ASAP2O43150 1006 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 COL19A1Q14993 1142 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 XKR9Q5GH70 373 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 TCEAL5Q5H9L2 206 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 ZNF579Q8NAF0 562 aaKnown RBP20.34■□□□□ 0.85
VCX3A-203ENST00000612369 KLHL23Q8NBE8 558 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 SPPL3Q8TCT6 385 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms