RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RDM1Q8NG50 284 aa30.66■■■□□ 2.5
CSPG5-205ENST00000610462 CAPZA3Q96KX2 299 aa30.66■■■□□ 2.5
CSPG5-205ENST00000610462 NOX5Q96PH1 765 aa30.66■■■□□ 2.5
CSPG5-205ENST00000610462 RHOXF2Q9BQY4 288 aa30.66■■■□□ 2.5
CSPG5-205ENST00000610462 ATP2A1O14983 1001 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 FMO5P49326 533 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 JAM2P57087 298 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 TMEM132BQ14DG7 1078 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 TMOD4Q9NZQ9 345 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 ADAMTS1Q9UHI8 967 aa30.65■■■□□ 2.5
CSPG5-205ENST00000610462 TUBBP07437 444 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 PRKCIP41743 596 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 PLS1Q14651 629 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 ENOX2Q16206 610 aaKnown RBP30.64■■■□□ 2.5
CSPG5-205ENST00000610462 NLRX1Q86UT6 975 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 GPC2Q8N158 579 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 RBM46Q8TBY0 533 aaKnown RBP30.64■■■□□ 2.5
CSPG5-205ENST00000610462 HNRNPLLQ8WVV9 542 aaKnown RBP30.64■■■□□ 2.5
CSPG5-205ENST00000610462 ANKEF1Q9NU02 776 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 POLR2AP24928 1970 aaKnown RBP30.64■■■□□ 2.5
CSPG5-205ENST00000610462 WDR90Q96KV7 1748 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 MAFGO15525 162 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 PTK2Q05397 1052 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 DRC1Q96MC2 740 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 ACCSQ96QU6 501 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 SENP7Q9BQF6 1050 aa30.64■■■□□ 2.5
CSPG5-205ENST00000610462 AJAP1Q9UKB5 411 aaPredicted RBP30.64■■■□□ 2.5
CSPG5-205ENST00000610462 BACH1O14867 736 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 ZNF185O15231 689 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 EXOC3O60645 756 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 TBC1D8O95759 1140 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 NAB2Q15742 525 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 ZNF746Q6NUN9 644 aaPredicted RBP30.63■■■□□ 2.49
CSPG5-205ENST00000610462 NSUN6Q8TEA1 469 aaKnown RBP30.63■■■□□ 2.49
CSPG5-205ENST00000610462 TMEM174Q8WUU8 243 aa30.63■■■□□ 2.49
CSPG5-205ENST00000610462 HIRAP54198 1017 aaPredicted RBP30.62■■■□□ 2.49
CSPG5-205ENST00000610462 C10orf76Q5T2E6 689 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 ZNF571Q7Z3V5 609 aaPredicted RBP30.62■■■□□ 2.49
CSPG5-205ENST00000610462 INPP4AQ96PE3 977 aaPredicted RBP30.62■■■□□ 2.49
CSPG5-205ENST00000610462 ST6GALNAC4Q9H4F1 302 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 AFG3L2Q9Y4W6 797 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 SUPT20HL1Q3ZLR7 823 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 IQCEQ6IPM2 695 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 CAGE1Q8TC20 777 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 MOV10L1Q9BXT6 1211 aaKnown RBP30.62■■■□□ 2.49
CSPG5-205ENST00000610462 TEX13BQ9BXU2 312 aa30.62■■■□□ 2.49
CSPG5-205ENST00000610462 TMEM150BA6NC51 233 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 BUB1O43683 1085 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 ANXA13P27216 316 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 C12orf56Q8IXR9 622 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 HYOU1Q9Y4L1 999 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 BFSP1Q12934 665 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 LONRF2Q1L5Z9 754 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 XKR9Q5GH70 373 aa30.61■■■□□ 2.49
CSPG5-205ENST00000610462 UTP14CQ5TAP6 766 aaKnown RBP30.61■■■□□ 2.49
CSPG5-205ENST00000610462 LOC285556D6RIA3 1793 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 PDE2AO00408 941 aaPredicted RBP30.6■■■□□ 2.49
CSPG5-205ENST00000610462 ERLIN1O75477 346 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 TCP1P17987 556 aaKnown RBP30.6■■■□□ 2.49
CSPG5-205ENST00000610462 GTF2BQ00403 316 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 DMTNQ08495 405 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 GJB7Q6PEY0 223 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 SH2D3AQ9BRG2 576 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 MAF1Q9H063 256 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 ACAD9Q9H845 621 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 HOXC10Q9NYD6 342 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 CYP39A1Q9NYL5 469 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 PCDHA10Q9Y5I2 948 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 MYPNQ86TC9 1320 aa30.6■■■□□ 2.49
CSPG5-205ENST00000610462 PLA2G4AP47712 749 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 NAP1L1P55209 391 aaKnown RBP30.59■■■□□ 2.49
CSPG5-205ENST00000610462 KIAA0753Q2KHM9 967 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 HAUS6Q7Z4H7 955 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 CREG2Q8IUH2 290 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.59■■■□□ 2.49
CSPG5-205ENST00000610462 OSBPL9Q96SU4 736 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 TRIM49P0CI25 452 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 TRIM49CP0CI26 452 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 KLRC1P26715 233 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 CBWD6Q4V339 395 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 CBWD3Q5JTY5 395 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 CBWD5Q5RIA9 395 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 PLA2G4FQ68DD2 849 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 SLC17A8Q8NDX2 589 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 FUT8Q9BYC5 575 aa30.59■■■□□ 2.49
CSPG5-205ENST00000610462 ARID2Q68CP9 1835 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 BTNL10A8MVZ5 291 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 SASH3O75995 380 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 KCNA2P16389 499 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 FERP16591 822 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 STAT1P42224 750 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 NCKAP1LP55160 1127 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 SNRPFP62306 86 aaKnown RBP30.58■■■□□ 2.49
CSPG5-205ENST00000610462 VSNL1P62760 191 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 WDR93Q6P2C0 686 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 ZNF572Q7Z3I7 529 aaPredicted RBP30.58■■■□□ 2.49
CSPG5-205ENST00000610462 A1CFQ9NQ94 594 aaKnown RBP30.58■■■□□ 2.49
CSPG5-205ENST00000610462 TSKSQ9UJT2 592 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 DOCK5Q9H7D0 1870 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 SPDYE16A6NNV3 312 aaPredicted RBP30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms