RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM50AQ14320 339 aaKnown RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 SEPT7Q16181 437 aaKnown RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 SKOR2Q2VWA4 1001 aaPredicted RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 CATSPEREQ5SY80 951 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 PRAMEF18Q5VWM3 479 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 STPG3Q8N7X2 389 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ADAMTS17Q8TE56 1095 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 GBP4Q96PP9 640 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 SPATA25Q9BR10 227 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 LUC7LQ9NQ29 371 aaKnown RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ACSS2Q9NR19 701 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 KCND1Q9NSA2 647 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 GALNT8Q9NY28 637 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZFP69BQ9UJL9 534 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 MAPRE3Q9UPY8 281 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 STRCP1A6NGW2 1772 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 CPS1P31327 1500 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 GOLGA6L22H0YM25 854 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 GAS7O60861 476 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 MPIG6BO95866 241 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 CHGBP05060 677 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 COL6A1P12109 1028 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 MC4RP32245 332 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 SCNN1BP51168 640 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZNF174Q15697 407 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 SMAD2Q15796 467 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 CREB3L3Q68CJ9 461 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 MCTP2Q6DN12 878 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 TRMT10BQ6PF06 316 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 SPOCD1Q6ZMY3 1216 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZNF761Q86XN6 746 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 THNSL2Q86YJ6 484 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 SP8Q8IXZ3 490 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 KIAA1958Q8N8K9 716 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 TXNDC5Q8NBS9 432 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 LEO1Q8WVC0 666 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZCCHC14Q8WYQ9 949 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 KCNC2Q96PR1 638 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 TACO1Q9BSH4 297 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 AMNQ9BXJ7 453 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 L2HGDHQ9H9P8 463 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 INCENPQ9NQS7 918 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 OXSMQ9NWU1 459 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 UCKL1Q9NWZ5 548 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 ASB1Q9Y576 335 aa5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 XIRP1Q702N8 1843 aaKnown RBP5.07□□□□□ -1.6
CKS1BP3-201ENST00000600888 NPHP4O75161 1426 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SPHKAPQ2M3C7 1700 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 TMEM131LA2VDJ0 1609 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 PRAMEF22A3QJZ6 481 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SASH1O94885 1247 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 KNG1P01042 644 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 CYP17A1P05093 508 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SLC9A1P19634 815 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 FNTBP49356 437 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 DPP8Q6V1X1 898 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 RNF180Q86T96 592 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 OR2W6PQ8NHA6 318 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 CHTF18Q8WVB6 975 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 PCIF1Q9H4Z3 704 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZCCHC4Q9H5U6 513 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SLC52A1Q9NWF4 448 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 THG1LQ9NWX6 298 aaKnown RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 H2AFY2Q9P0M6 372 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SPO11Q9Y5K1 396 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 ADGRB3O60242 1522 aa5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 SCAF11Q99590 1463 aaKnown RBP5.06□□□□□ -1.6
CKS1BP3-201ENST00000600888 TMEM2Q9UHN6 1383 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZNF335Q9H4Z2 1342 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 CHD2O14647 1828 aaKnown RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 NOBOXO60393 691 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 CYP1A1P04798 512 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 PTX3P26022 381 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 STAT3P40763 770 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 ECE1P42892 770 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 RGL3Q3MIN7 710 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 FAM26FQ5R3K3 315 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 NT5DC1Q5TFE4 455 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 DDX46Q7L014 1031 aaKnown RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 RTN4RL1Q86UN2 441 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 UBR7Q8N806 425 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 SMC1BQ8NDV3 1235 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 FEZF2Q8TBJ5 459 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 ERCC4Q92889 916 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 FOXRED1Q96CU9 486 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 YTHDC1Q96MU7 727 aaKnown RBP5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 BTBD2Q9BX70 525 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 TMEM168Q9H0V1 697 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 CAAP1Q9H8G2 361 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 PARD6AQ9NPB6 346 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 FTSJ1Q9UET6 329 aa5.05□□□□□ -1.6
CKS1BP3-201ENST00000600888 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 KIF1BO60333 1816 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms