RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DNM3Q9UQ16 869 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 ATP6V1DQ9Y5K8 247 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 SQORQ9Y6N5 450 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 SLC26A4O43511 780 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 BAIAP3O94812 1187 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 GPC3P51654 580 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 CRYBB1P53674 252 aaPredicted RBP21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 NUCB2P80303 420 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 CDC42EP1Q00587 391 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 DNM1Q05193 864 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 IKBKEQ14164 716 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 HYIQ5T013 277 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 RHPN2Q8IUC4 686 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 NLRP7Q8WX94 980 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 PSPC1Q8WXF1 523 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 APBB2Q92870 758 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 CLIC6Q96NY7 704 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 PLIN2Q99541 437 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 BHMT2Q9H2M3 363 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 CDHR5Q9HBB8 845 aa21.88■■□□□ 1.09
SHKBP1-214ENST00000597396 E9PMD0 336 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 GPR32O75388 356 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 EYA4O95677 639 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 KCNJ6P48051 423 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 GRB10Q13322 594 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 SPECC1Q5M775 1068 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 PADI6Q6TGC4 694 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 PNMA5Q96PV4 448 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 XPNPEP1Q9NQW7 623 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 CXXC1Q9P0U4 656 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 COL4A3BPQ9Y5P4 624 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 SLC4A7Q9Y6M7 1214 aa21.87■■□□□ 1.09
SHKBP1-214ENST00000597396 ABHD14A-ACY1A0A1B0GW23 586 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 RBAK-RBAKDNI3L0D1 243 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 EFCAB14O75071 495 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 PPP6R2O75170 966 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 RPS6KA5O75582 802 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 CD52P31358 61 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 TXLNAP40222 546 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 PAK2Q13177 524 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 TCTN1Q2MV58 587 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 ODR4Q5SWX8 454 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 RASIP1Q5U651 963 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 KCTD17Q8N5Z5 321 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 MCPH1Q8NEM0 835 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 NLRP4Q96MN2 994 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 ADAMTS10Q9H324 1103 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 AGO3Q9H9G7 860 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 STXBP5LQ9Y2K9 1186 aa21.86■■□□□ 1.09
SHKBP1-214ENST00000597396 KRT85P78386 507 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 TMEM119Q4V9L6 283 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 MAEAQ7L5Y9 396 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 KCNK18Q7Z418 384 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 ZNF410Q86VK4 478 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 KCNG4Q8TDN1 519 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 PRPF31Q8WWY3 499 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 SYMPKQ92797 1274 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 EPSTI1Q96J88 318 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 GCOM2Q9BZD3 368 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 CCSER1Q9C0I3 900 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 PADI3Q9ULW8 664 aa21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 NOC2LQ9Y3T9 749 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-214ENST00000597396 A0A087WZ62 844 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 ASAP2O43150 1006 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 SSBP05455 408 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 LAMTOR4Q0VGL1 99 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 NFX1Q12986 1120 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 KARSQ15046 597 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 KSR1Q8IVT5 923 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 TMEM40Q8WWA1 233 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 FDXACB1Q9BRP7 624 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 POLR3FQ9H1D9 316 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 CCDC39Q9UFE4 941 aa21.84■■□□□ 1.09
SHKBP1-214ENST00000597396 GPR182O15218 404 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 SRGAP2CP0DJJ0 459 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 CYP11B2P19099 503 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 PLCG1P19174 1290 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 EIF4BP23588 611 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 WDR5P61964 334 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 MXD4Q14582 209 aaPredicted RBP21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 FAM102BQ5T8I3 360 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 USP49Q70CQ1 688 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 SLC9A7Q96T83 725 aa21.83■■□□□ 1.09
SHKBP1-214ENST00000597396 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 CUTAO60888 179 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 DARSP14868 501 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 DDIT3P35638 169 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 ME1P48163 572 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 TFDP1Q14186 410 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 FAM109BQ6ICB4 259 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 FAM228AQ86W67 206 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 FAM161BQ96MY7 647 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 FTHL17Q9BXU8 183 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 INO80BQ9C086 356 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 ERVK-5Q9HDB9 667 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 GPRC5CQ9NQ84 441 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 ST3GAL5Q9UNP4 418 aa21.82■■□□□ 1.08
SHKBP1-214ENST00000597396 TTC3P53804 2025 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms