RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 VWA3AA6NCI4 1184 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 SLC26A4O43511 780 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 DARSP14868 501 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 DRP2Q13474 957 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 MXD4Q14582 209 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 IL17AQ16552 155 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 POTEGQ6S5H5 508 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 TMEM40Q8WWA1 233 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 PRPF31Q8WWY3 499 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 NKX2-4Q9H2Z4 354 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 ZNF576Q9H609 170 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 INSL6Q9Y581 213 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 TET1Q8NFU7 2136 aa19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 DENND3A2RUS2 1198 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 STAG3L1P0CL83 205 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 ZSCAN20P17040 1043 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 TFDP1Q14186 410 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 PPP2R2DQ66LE6 453 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 FAM228AQ86W67 206 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 MCPH1Q8NEM0 835 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 CDK5RAP3Q96JB5 506 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 C1orf112Q9NSG2 853 aa19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 YBX2Q9Y2T7 364 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-212ENST00000596163 A0A087WZ62 844 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 UPP2O95045 317 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 SFPQP23246 707 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 LONP1P36776 959 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 LAMTOR4Q0VGL1 99 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 FAM117BQ6P1L5 589 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 Q7L0L9 218 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 ZNF668Q96K58 619 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 NLRP4Q96MN2 994 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 FDXACB1Q9BRP7 624 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 BMP2KQ9NSY1 1161 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 DDX19AQ9NUU7 478 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 MTMR10Q9NXD2 777 aa19.22■□□□□ 0.67
SHKBP1-212ENST00000596163 A0A087WWV3 80 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 USO1O60763 962 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 CA3P07451 260 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 SRGAP2CP0DJJ0 459 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 MYOGP15173 224 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 UBA7P41226 1012 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 PADI6Q6TGC4 694 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 SRGAP1Q7Z6B7 1085 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 RTN4RL1Q86UN2 441 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 FAM161BQ96MY7 647 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 YME1L1Q96TA2 773 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 ADAM2Q99965 735 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 TTYH1Q9H313 450 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 XPNPEP1Q9NQW7 623 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 CHST12Q9NRB3 414 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 RGS18Q9NS28 235 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 LRFN2Q9ULH4 789 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 CLIC4Q9Y696 253 aa19.21■□□□□ 0.67
SHKBP1-212ENST00000596163 WDR81Q562E7 1941 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 PP2D1A8MPX8 630 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 EYA4O95677 639 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 CYP11B2P19099 503 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 ARL2P36404 184 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 PHKA2P46019 1235 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 HTRA4P83105 476 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 POU5F1BQ06416 359 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 ECM1Q16610 540 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 SLC24A5Q71RS6 500 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 TMCO2Q7Z6W1 182 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 NPAS4Q8IUM7 802 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 KSR1Q8IVT5 923 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 CALML4Q96GE6 196 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 BHMT2Q9H2M3 363 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 TMX1Q9H3N1 280 aa19.2■□□□□ 0.66
SHKBP1-212ENST00000596163 CDC25AP30304 524 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 SARSP49591 514 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 PCBP1Q15365 356 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 HYIQ5T013 277 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 FAM173BQ6P4H8 233 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 CATSPER4Q7RTX7 472 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 CABP7Q86V35 215 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 RNF149Q8NC42 400 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 PCDHB7Q9Y5E2 793 aa19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-212ENST00000596163 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 DSC3Q14574 896 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 PTPAQ15257 358 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 FAM102BQ5T8I3 360 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 RASSF8Q8NHQ8 419 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 LINC01599Q8WXQ3 324 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 MMTAG2Q9BU76 263 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 POLR3FQ9H1D9 316 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms