RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 CMTR2Q8IYT2 770 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 NLRP7Q8WX94 980 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 SLC7A3Q8WY07 619 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 ZNF668Q96K58 619 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 CEP170P1Q96L14 293 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 ADAM2Q99965 735 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 RGS18Q9NS28 235 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 NOL7Q9UMY1 257 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 RWDD3Q9Y3V2 267 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 UNC80Q8N2C7 3258 aa12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 FNDC1Q4ZHG4 1894 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-208ENST00000578178 C9IYK1 514 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 LYPLA2O95372 231 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 U2AF2P26368 475 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■■■■□ 23.2
PPP4R1-208ENST00000578178 CDC42EP1Q00587 391 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 BTG3Q14201 252 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 DSC3Q14574 896 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 SLC24A5Q71RS6 500 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 OTUD6AQ7L8S5 288 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 TMEM192Q8IY95 271 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 DHX33Q9H6R0 707 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 LMCD1Q9NZU5 365 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
PPP4R1-208ENST00000578178 ATG2AQ2TAZ0 1938 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 SLITRK3O94933 977 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 LINC00271P0C7V0 271 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 GJB2P29033 226 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 CTNNB1P35222 781 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 EMC2Q15006 297 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 ZNF174Q15697 407 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 XKR9Q5GH70 373 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 RHPN2Q8IUC4 686 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 CLP1Q92989 425 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 NLRP4Q96MN2 994 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 COL4A3BPQ9Y5P4 624 aa12.21□□□□□ -0.45
PPP4R1-208ENST00000578178 A0A087WZ62 844 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 H3BNC9 293 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 GATMP50440 423 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 NBR1Q14596 966 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 PTPROQ16827 1216 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 CCDC43Q96MW1 224 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 MTRQ99707 1265 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 INO80BQ9C086 356 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 PCDHB7Q9Y5E2 793 aa12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-208ENST00000578178 BRWD1Q9NSI6 2320 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 H3BQV1 296 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 DGAT1O75907 488 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 RB1P06400 928 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 FGFR4P22455 802 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 BMPR1AP36894 532 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 TECP42680 631 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 RARRES1P49788 294 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 GPM6BQ13491 265 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 TIGD5Q53EQ6 642 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 HAUS3Q68CZ6 603 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 ATP6V0A4Q9HBG4 840 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
PPP4R1-208ENST00000578178 ZBTB39O15060 712 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms