RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 VPS72Q15906 364 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 RINT1Q6NUQ1 792 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 TADA2BQ86TJ2 420 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 LARGE2Q8N3Y3 721 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 ARHGEF26Q96DR7 871 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 JPH2Q9BR39 696 aaPredicted RBP14.81□□□□□ -0.04
NDEL1-204ENST00000578172 NUCKS1Q9H1E3 243 aaKnown RBP14.81□□□□□ -0.04
NDEL1-204ENST00000578172 NEUROG2Q9H2A3 272 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 PPP1R9AQ9ULJ8 1098 aa14.81□□□□□ -0.04
NDEL1-204ENST00000578172 FOXN3O00409 490 aaPredicted RBP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 HSD17B3P37058 310 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 DLG4P78352 724 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 BIRC3Q13489 604 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 XKR9Q5GH70 373 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 CEP63Q96MT8 703 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 TMEM39BQ9GZU3 492 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 TSKSQ9UJT2 592 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 ROBO1Q9Y6N7 1651 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 FTLP02792 175 aaPredicted RBP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 LSP1P33241 339 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 MARCKSL1P49006 195 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 CETN1Q12798 172 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 DDX3XO00571 662 aaKnown RBP eCLIP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 HIP1RO75146 1068 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 KAZNQ674X7 775 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 CCDC17Q96LX7 622 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 CBWD1Q9BRT8 395 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 TAF1DQ9H5J8 278 aaPredicted RBP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 RAVER2Q9HCJ3 691 aaKnown RBP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 KLHL11Q9NVR0 708 aa14.8□□□□□ -0.04
NDEL1-204ENST00000578172 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.8□□□□□ -0.04
NDEL1-204ENST00000578172 MAGEA9P43362 315 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 SLC12A3P55017 1021 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 C1orf54Q8WWF1 131 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 PSD3Q9NYI0 1048 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 EIF4E1BA6NMX2 242 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 CTNND1O60716 968 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 SPATA31C1P0DKV0 1188 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 DLGAP5Q15398 846 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 GRIPAP1Q4V328 841 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 FIGNQ5HY92 759 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 TPCN2Q8NHX9 752 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 TYW1Q9NV66 732 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 CYP26A1O43174 497 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 MICALCLQ6ZW33 695 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 RPUSD2Q8IZ73 545 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 RNF10Q8N5U6 811 aaKnown RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 LBHD1Q9BQE6 289 aaPredicted RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 VIPAS39Q9H9C1 493 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 ZNF277Q9NRM2 450 aaPredicted RBP14.79□□□□□ -0.04
NDEL1-204ENST00000578172 DAAM1Q9Y4D1 1078 aa14.79□□□□□ -0.04
NDEL1-204ENST00000578172 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 MEI1Q5TIA1 1274 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 LRRC45Q96CN5 670 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 TOPORSQ9NS56 1045 aaPredicted RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 RPA1P27694 616 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 LLGL2Q6P1M3 1020 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 TMEM179Q6ZVK1 233 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 DHX38Q92620 1227 aaKnown RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 SLC35C1Q96A29 364 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 HAUS1Q96CS2 278 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 C18orf8Q96DM3 657 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 FMO2Q99518 471 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 INTS2Q9H0H0 1204 aaKnown RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 KCTD10Q9H3F6 313 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 FAM198AQ9UFP1 575 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 DBR1Q9UK59 544 aaKnown RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 IGSF9BQ9UPX0 1349 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 IPO5O00410 1097 aaKnown RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 FMO5P49326 533 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 DR1Q01658 176 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 TNIP1Q15025 636 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 FAM133BQ5BKY9 247 aaKnown RBP14.78□□□□□ -0.04
NDEL1-204ENST00000578172 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 SP8Q8IXZ3 490 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 ZNF653Q96CK0 615 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 TBC1D31Q96DN5 1066 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 CCT8L2Q96SF2 557 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 BCL9LQ86UU0 1499 aa14.78□□□□□ -0.04
NDEL1-204ENST00000578172 CASZ1Q86V15 1759 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 ALDH1B1P30837 517 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 PLCB3Q01970 1234 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 COL23A1Q86Y22 540 aaPredicted RBP14.77□□□□□ -0.04
NDEL1-204ENST00000578172 GDAP1Q8TB36 358 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 ATP6V1G3Q96LB4 118 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.04
NDEL1-204ENST00000578172 TCHPQ9BT92 498 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 EFCC1Q9HA90 598 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.04
NDEL1-204ENST00000578172 GABPAQ06546 454 aa14.77□□□□□ -0.04
NDEL1-204ENST00000578172 CHADLQ6NUI6 762 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms