RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PRRX2Q99811 253 aa23.6■■□□□ 1.37
HERC2-204ENST00000563945 FSCN2O14926 492 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 OATP04181 439 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 TBC1D8BQ0IIM8 1120 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 CBX2Q14781 532 aaPredicted RBP23.59■■□□□ 1.37
HERC2-204ENST00000563945 LLGL2Q6P1M3 1020 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 ZBTB33Q86T24 672 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 RASGRP4Q8TDF6 673 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 PHKBQ93100 1093 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 CCDC136Q96JN2 1154 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 CASD1Q96PB1 797 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 SPG21Q9NZD8 308 aa23.59■■□□□ 1.37
HERC2-204ENST00000563945 GAS7O60861 476 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 SFNP31947 248 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 CA8P35219 290 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 JAK3P52333 1124 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 RBM10P98175 930 aaKnown RBP23.58■■□□□ 1.37
HERC2-204ENST00000563945 ECHDC2Q86YB7 292 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 TMEM87AQ8NBN3 555 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 NLRP7Q8WX94 980 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 ZNF668Q96K58 619 aaPredicted RBP23.58■■□□□ 1.37
HERC2-204ENST00000563945 TEKT3Q9BXF9 490 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 SLC26A6Q9BXS9 759 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 ADAMTS10Q9H324 1103 aa23.58■■□□□ 1.37
HERC2-204ENST00000563945 CHMP2AO43633 222 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 HOXB8P17481 243 aaPredicted RBP23.57■■□□□ 1.36
HERC2-204ENST00000563945 USP11P51784 963 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 NLRP5P59047 1200 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 CDC42EP1Q00587 391 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 PRKCEQ02156 737 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 ANKRD54Q6NXT1 300 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 TMEM184AQ6ZMB5 413 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 VN1R2Q8NFZ6 395 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 SUSD6Q92537 303 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 RIT2Q99578 217 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 APOL5Q9BWW9 433 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 DACT1Q9NYF0 836 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 TECTAO75443 2155 aa23.57■■□□□ 1.36
HERC2-204ENST00000563945 ADAMTS3O15072 1205 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 EOMESO95936 686 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 DARSP14868 501 aaKnown RBP23.56■■□□□ 1.36
HERC2-204ENST00000563945 PSMA5P28066 241 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 PTPN5P54829 565 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 SIGLEC14Q08ET2 396 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 TPRNQ4KMQ1 711 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 LRCH2Q5VUJ6 765 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 LRRC55Q6ZSA7 311 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 SKAP1Q86WV1 359 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 RNF26Q9BY78 433 aaPredicted RBP23.56■■□□□ 1.36
HERC2-204ENST00000563945 C22orf23Q9BZE7 217 aa23.56■■□□□ 1.36
HERC2-204ENST00000563945 MSH4O15457 936 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 ALDH7A1P49419 539 aaKnown RBP23.55■■□□□ 1.36
HERC2-204ENST00000563945 DNM2P50570 870 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 GPC3P51654 580 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 SMC1AQ14683 1233 aaKnown RBP23.55■■□□□ 1.36
HERC2-204ENST00000563945 CES5AQ6NT32 575 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 FBXL6Q8N531 539 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 CASP10Q92851 521 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 MRPL9Q9BYD2 267 aaKnown RBP23.55■■□□□ 1.36
HERC2-204ENST00000563945 GCOM2Q9BZD3 368 aaPredicted RBP23.55■■□□□ 1.36
HERC2-204ENST00000563945 VPS54Q9P1Q0 977 aa23.55■■□□□ 1.36
HERC2-204ENST00000563945 C5orf42Q9H799 3197 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 A0A0U1RQF3 1178 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 HIDE1A8MVS5 230 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 ZNF862O60290 1169 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 PBX3P40426 434 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 MIER3Q7Z3K6 550 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 TRIM22Q8IYM9 498 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 LINC01465Q8N7H1 131 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 HELQQ8TDG4 1101 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 S1PR5Q9H228 398 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 NR2E1Q9Y466 385 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 SNX14Q9Y5W7 946 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 ZNF318Q5VUA4 2279 aa23.54■■□□□ 1.36
HERC2-204ENST00000563945 IFNAR1P17181 557 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 RPS6KB1P23443 525 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 CCT2P78371 535 aaKnown RBP23.53■■□□□ 1.36
HERC2-204ENST00000563945 SLC5A5Q92911 643 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 KCNB2Q92953 911 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 LENG9Q96B70 501 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 INO80BQ9C086 356 aaPredicted RBP23.53■■□□□ 1.36
HERC2-204ENST00000563945 SH3GLB2Q9NR46 395 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 RNF19AQ9NV58 838 aa23.53■■□□□ 1.36
HERC2-204ENST00000563945 SEPT9Q9UHD8 586 aaPredicted RBP23.53■■□□□ 1.36
HERC2-204ENST00000563945 FGFR4P22455 802 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 HSPA4P34932 840 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 PTPN21Q16825 1174 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 MTERF2Q49AM1 385 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 XKR3Q5GH77 459 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 SYCE2Q6PIF2 218 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 MRPL43Q8N983 215 aaKnown RBP23.52■■□□□ 1.36
HERC2-204ENST00000563945 RDM1Q8NG50 284 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 TMEM169Q96HH4 297 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 UNC45AQ9H3U1 944 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 CHST12Q9NRB3 414 aa23.52■■□□□ 1.36
HERC2-204ENST00000563945 CARNS1A5YM72 827 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 CXCL14O95715 111 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 SKIP12755 728 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 SP100P23497 879 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms