RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 RNF26Q9BY78 433 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-202ENST00000562722 KCNH6Q9H252 994 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 SNX14Q9Y5W7 946 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 NID2Q14112 1375 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 TMEM221A6NGB7 291 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 M0R296 226 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 FSCN2O14926 492 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 MSH4O15457 936 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 ZNF862O60290 1169 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
SF3B3-202ENST00000562722 PSMA5P28066 241 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 CIITAP33076 1130 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 HSPA4P34932 840 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 MRE11P49959 708 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 JAK3P52333 1124 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 PLCB3Q01970 1234 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 LRCH2Q5VUJ6 765 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 KCNT2Q6UVM3 1135 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 TRIM67Q6ZTA4 783 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 TMC7Q7Z402 723 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 ZNF710Q8N1W2 664 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 PBXIP1Q96AQ6 731 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 LENG9Q96B70 501 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 NGRNQ9NPE2 291 aaKnown RBP14.65□□□□□ -0.06
SF3B3-202ENST00000562722 SEPT9Q9UHD8 586 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-202ENST00000562722 LZTS1Q9Y250 596 aa14.65□□□□□ -0.06
SF3B3-202ENST00000562722 FNDC1Q4ZHG4 1894 aaPredicted RBP14.64□□□□□ -0.07
SF3B3-202ENST00000562722 DARSP14868 501 aaKnown RBP14.64□□□□□ -0.07
SF3B3-202ENST00000562722 FGFR4P22455 802 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 SFNP31947 248 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 GPC3P51654 580 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 ZXDAP98168 799 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 UGCGQ16739 394 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 LRRC55Q6ZSA7 311 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 MIER3Q7Z3K6 550 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 ZBTB33Q86T24 672 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 ECHDC2Q86YB7 292 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 KCNB2Q92953 911 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 GJA10Q969M2 543 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 RIT2Q99578 217 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 UNC45AQ9H3U1 944 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
SF3B3-202ENST00000562722 SPG21Q9NZD8 308 aa14.64□□□□□ -0.07
SF3B3-202ENST00000562722 EVPLQ92817 2033 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 HIDE1A8MVS5 230 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 IFNAR1P17181 557 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 ATF7P17544 494 aaPredicted RBP14.63□□□□□ -0.07
SF3B3-202ENST00000562722 SP100P23497 879 aaPredicted RBP14.63□□□□□ -0.07
SF3B3-202ENST00000562722 USP11P51784 963 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 CBX2Q14781 532 aaPredicted RBP14.63□□□□□ -0.07
SF3B3-202ENST00000562722 MTERF2Q49AM1 385 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 ANKRD54Q6NXT1 300 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 LINC01465Q8N7H1 131 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 TBCKQ8TEA7 893 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 SLC5A5Q92911 643 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 RNF19AQ9NV58 838 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 DACT1Q9NYF0 836 aa14.63□□□□□ -0.07
SF3B3-202ENST00000562722 CPLX1O14810 134 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 REC8O95072 547 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 PDIA3P30101 505 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 DNM2P50570 870 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 SSRP1Q08945 709 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 BMS1Q14692 1282 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 NTRK3Q16288 839 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 CLLU1OSQ5K130 101 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 SUSD6Q92537 303 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 MRPL9Q9BYD2 267 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 GCOM2Q9BZD3 368 aaPredicted RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 SH3GLB2Q9NR46 395 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 C5orf42Q9H799 3197 aa14.62□□□□□ -0.07
SF3B3-202ENST00000562722 MYH9P35579 1960 aaKnown RBP14.62□□□□□ -0.07
SF3B3-202ENST00000562722 A0A0U1RQF3 1178 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 TDP2O95551 362 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 EOMESO95936 686 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 SFPQP23246 707 aaKnown RBP eCLIP14.61□□□□□ -0.07
SF3B3-202ENST00000562722 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
SF3B3-202ENST00000562722 SIGLEC14Q08ET2 396 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 DRP2Q13474 957 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 XKR3Q5GH77 459 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 TMEM184AQ6ZMB5 413 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 BMP8AQ7Z5Y6 402 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 FBXL16Q8N461 479 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 RDM1Q8NG50 284 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 CASP10Q92851 521 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 TMEM169Q96HH4 297 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 PCDHA4Q9UN74 947 aa14.61□□□□□ -0.07
SF3B3-202ENST00000562722 TMEM150BA6NC51 233 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms