RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MAEAQ7L5Y9 396 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 FAM161BQ96MY7 647 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 PLIN2Q99541 437 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 ADAMTS10Q9H324 1103 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 MSRAQ9UJ68 235 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 STK24Q9Y6E0 443 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 SQORQ9Y6N5 450 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 A0A087WZ62 844 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 DGAT1O75907 488 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 F13A1P00488 732 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 FGFR4P22455 802 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 GRIN1Q05586 938 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 RAB30Q15771 203 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 ZNF697Q5TEC3 545 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 PHOSPHO2Q8TCD6 241 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 TCP11Q8WWU5 503 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 PRPF31Q8WWY3 499 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 PSPC1Q8WXF1 523 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 TIFAQ96CG3 184 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 FDXACB1Q9BRP7 624 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 MMTAG2Q9BU76 263 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 NKX2-4Q9H2Z4 354 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 XPNPEP1Q9NQW7 623 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 ST3GAL5Q9UNP4 418 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 YBX2Q9Y2T7 364 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
RABGGTA-206ENST00000558649 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 E9PMD0 336 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 TLL1O43897 1013 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 SRGAP2CP0DJJ0 459 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 XRCC6P12956 609 aaKnown RBP eCLIP17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 MUTP22033 750 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 PTPAQ15257 358 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 RASSF8Q8NHQ8 419 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 GCOM2Q9BZD3 368 aaPredicted RBP17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 BHMT2Q9H2M3 363 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 ERVK-5Q9HDB9 667 aa17.64■□□□□ 0.41
RABGGTA-206ENST00000558649 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 GPR182O15218 404 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 DARSP14868 501 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 EIF4BP23588 611 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 LAMTOR4Q0VGL1 99 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 ODR4Q5SWX8 454 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 FAM102BQ5T8I3 360 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 PADI6Q6TGC4 694 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 CABP7Q86V35 215 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 DEFB123Q8N688 67 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 FTHL17Q9BXU8 183 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 POLR3FQ9H1D9 316 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 TMX1Q9H3N1 280 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 GPRC5CQ9NQ84 441 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 DNM3Q9UQ16 869 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 PCDHA11Q9Y5I1 949 aa17.63■□□□□ 0.41
RABGGTA-206ENST00000558649 ENPP3O14638 875 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 MGEA5O60502 916 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 SSBP05455 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 CA3P07451 260 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 UBA7P41226 1012 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 CDC42EP1Q00587 391 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 STK38Q15208 465 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 KCNK18Q7Z418 384 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 ZNF410Q86VK4 478 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 ZNF710Q8N1W2 664 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 ASAP3Q8TDY4 903 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 AK8Q96MA6 479 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 CSRNP2Q9H175 543 aa17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 FBXO2Q9UK22 296 aaPredicted RBP17.62■□□□□ 0.41
RABGGTA-206ENST00000558649 GJB5O95377 273 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 SFPQP23246 707 aaKnown RBP eCLIP17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 GRB10Q13322 594 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 GPR153Q6NV75 609 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 RTN4RL1Q86UN2 441 aaPredicted RBP17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 MCPH1Q8NEM0 835 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 CALML4Q96GE6 196 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 PNMA5Q96PV4 448 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 ADAM2Q99965 735 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 SLC28A3Q9HAS3 691 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
RABGGTA-206ENST00000558649 LCHNA4D1U4 455 aa17.6■□□□□ 0.41
RABGGTA-206ENST00000558649 EYA4O95677 639 aa17.6■□□□□ 0.41
RABGGTA-206ENST00000558649 PHKA2P46019 1235 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms