RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SUCLG2Q96I99 432 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 TNFRSF12AQ9NP84 129 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 ACSL6Q9UKU0 697 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 STRIP2Q9ULQ0 834 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 DIS3Q9Y2L1 958 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 ANKRD18BA2A2Z9 1011 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 B2RBV5 119 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 AURKAO14965 403 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 KCNH1O95259 989 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 TBC1D8O95759 1140 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 CT47B1P0C2W7 299 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 PI3P19957 117 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 RPS12P25398 132 aaKnown RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 SEPHS1P49903 392 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 NCKAP1LP55160 1127 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF280AP59817 542 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 AMPD2Q01433 879 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 MVKQ03426 396 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 CHRNDQ07001 517 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 ALDH1L2Q3SY69 923 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 RABL6Q3YEC7 729 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 SLC4A10Q6U841 1118 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 LMBR1LQ6UX01 489 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 CPNE8Q86YQ8 564 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 ANKRD44Q8N8A2 993 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 GLIS2Q9BZE0 524 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 CNTD2Q9H8S5 307 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 RXFP1Q9HBX9 757 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 SUSD2Q9UGT4 822 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 PGAP2Q9UHJ9 254 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 CNOT7Q9UIV1 285 aaKnown RBP5.21□□□□□ -1.58
VTI1B-203ENST00000554636 AKT3Q9Y243 479 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 KCTD3Q9Y597 815 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 HCFC2Q9Y5Z7 792 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF804BA4D1E1 1349 aa5.21□□□□□ -1.58
VTI1B-203ENST00000554636 ARAP2Q8WZ64 1704 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 ANKRD34BA5PLL1 514 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 C2orf71A6NGG8 1288 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 RASSF10A6NK89 507 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 H7C1D1 291 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 SNAP23O00161 211 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 NBPF7P0C2Y1 421 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 CDR1P51861 262 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF200P98182 395 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 IFIT5Q13325 482 aaKnown RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 PLEKHN1Q494U1 663 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 TBC1D10BQ4KMP7 808 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 DACT2Q5SW24 774 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 OLFML2BQ68BL8 750 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 C15orf52Q6ZUT6 534 aaKnown RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 VPS37DQ86XT2 251 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 PANK1Q8TE04 598 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 GMLQ99445 158 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 MPHOSPH8Q99549 860 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 MXD3Q9BW11 206 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 ANKRD2Q9GZV1 360 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 COA1Q9GZY4 146 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 BICC1Q9H694 974 aaKnown RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 SMC4Q9NTJ3 1288 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 C9orf78Q9NZ63 289 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 RWDD3Q9Y3V2 267 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 BACE2Q9Y5Z0 518 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 IRAK3Q9Y616 596 aa5.2□□□□□ -1.58
VTI1B-203ENST00000554636 ASTN2O75129 1339 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-203ENST00000554636 ADM5C9JUS6 153 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 RFXAPO00287 272 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 TAF5LO75529 589 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 CELF2O95319 508 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 HSPA1AP0DMV8 641 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 HSPA1BP0DMV9 641 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 L1CAMP32004 1257 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 RFX5P48382 616 aaPredicted RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 RARSP54136 660 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 YBX1P67809 324 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 GNL2Q13823 731 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 CCDC57Q2TAC2 916 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 STRIP1Q5VSL9 837 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 CST9Q5W186 159 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 EEF1DP3Q658K8 133 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 RCSD1Q6JBY9 416 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 C6orf15Q6UXA7 325 aaPredicted RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 DLK2Q6UY11 383 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 AGBL3Q8NEM8 1001 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 SIGLEC10Q96LC7 697 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 PUS3Q9BZE2 481 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 USP44Q9H0E7 712 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 CD209Q9NNX6 404 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 ACTR10Q9NZ32 417 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 GGA3Q9NZ52 723 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 NOB1Q9ULX3 412 aaKnown RBP5.19□□□□□ -1.58
VTI1B-203ENST00000554636 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
VTI1B-203ENST00000554636 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 NPHP3-ACAD11A0A0J9YXS1 232 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ZC3H12DA2A288 527 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 HRKO00198 91 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ABLIM1O14639 778 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms