RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SUCLA2Q9P2R7 463 aaPredicted RBP7.31□□□□□ -1.24
FOXN3-205ENST00000553904 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
FOXN3-205ENST00000553904 STK39Q9UEW8 545 aa7.31□□□□□ -1.24
FOXN3-205ENST00000553904 MRPL42Q9Y6G3 142 aaKnown RBP7.31□□□□□ -1.24
FOXN3-205ENST00000553904 EDIL3O43854 480 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 FGF18O76093 207 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 ITGB1P05556 798 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 SSTR3P32745 418 aaPredicted RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 RAB27AP51159 221 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 POLGP54098 1239 aaPredicted RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 ADAM15Q13444 863 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 DSC3Q14574 896 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 MXD4Q14582 209 aaPredicted RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 FAM102BQ5T8I3 360 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 B3GNT9Q6UX72 402 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 ECHDC2Q86YB7 292 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 RHPN2Q8IUC4 686 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 THNSL1Q8IYQ7 743 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 GJD3Q8N144 294 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 LINC01599Q8WXQ3 324 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 PGBD4Q96DM1 585 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 CCDC43Q96MW1 224 aaKnown RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 ZNF558Q96NG5 402 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 PPP1R16BQ96T49 567 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 TRAIPQ9BWF2 469 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 MRPL9Q9BYD2 267 aaKnown RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 TLE6Q9H808 572 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 KCNMB3Q9NPA1 279 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 NGRNQ9NPE2 291 aaKnown RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
FOXN3-205ENST00000553904 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 LIMCH1Q9UPQ0 1083 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 LZTS1Q9Y250 596 aa7.3□□□□□ -1.24
FOXN3-205ENST00000553904 IGKV6-21A0A0C4DH24 114 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 PI4K2BG5E9Z4 385 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 LINC00271P0C7V0 271 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 YWHABP31946 246 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 NDUFV1P49821 464 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 HMGN5P82970 282 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 GNL2Q13823 731 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 GIT2Q14161 759 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TFDP1Q14186 410 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 COL19A1Q14993 1142 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 CALCRLQ16602 461 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 ME3Q16798 604 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 CTC1Q2NKJ3 1217 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 XKR9Q5GH70 373 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TMEM31Q5JXX7 168 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TWF2Q6IBS0 349 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 KCNT2Q6UVM3 1135 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 GLB1LQ6UWU2 654 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 ANO5Q75V66 913 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 CATSPER4Q7RTX7 472 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 SRGAP1Q7Z6B7 1085 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TPH2Q8IWU9 490 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 LRRC43Q8N309 656 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 LINC01465Q8N7H1 131 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 RNF169Q8NCN4 708 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 CNNM3Q8NE01 707 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TET1Q8NFU7 2136 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 PSPC1Q8WXF1 523 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 GTF3C6Q969F1 213 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 AIFM3Q96NN9 605 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 NECAB3Q96P71 396 aaPredicted RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 LLPHQ9BRT6 129 aaKnown RBP7.29□□□□□ -1.24
FOXN3-205ENST00000553904 UBN1Q9NPG3 1134 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 TLR9Q9NR96 1032 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 ANKEF1Q9NU02 776 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 SPG21Q9NZD8 308 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 CD207Q9UJ71 328 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 KIF3AQ9Y496 699 aa7.29□□□□□ -1.24
FOXN3-205ENST00000553904 COL4A6Q14031 1691 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 COL6A3P12111 3177 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 A0A087WZ62 844 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 SLC37A4O43826 429 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 MGEA5O60502 916 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 GPR37L1O60883 481 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 ZNF623O75123 536 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 NR1I2O75469 434 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 ERLIN2O94905 339 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 ALDH2P05091 517 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 FGFR1P11362 822 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 COL9A1P20849 921 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 AXLP30530 894 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 TXKP42681 527 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 RBM25P49756 843 aaKnown RBP7.28□□□□□ -1.24
FOXN3-205ENST00000553904 RNASELQ05823 741 aaKnown RBP7.28□□□□□ -1.24
FOXN3-205ENST00000553904 POU5F1BQ06416 359 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 HYAL1Q12794 435 aa7.28□□□□□ -1.24
FOXN3-205ENST00000553904 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms