RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 FLOT1O75955 427 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 GFPT2O94808 682 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 H2AFZP0C0S5 128 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 PAX7P23759 505 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 PRELPP51888 382 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 PSMD2Q13200 908 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 H2AFVQ71UI9 128 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 SPICE1Q8N0Z3 855 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 TTLL1O95922 423 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 CXCL9Q07325 125 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 MTMR3Q13615 1198 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 SCFD1Q8WVM8 642 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 FMO2Q99518 471 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 ASTN2O75129 1339 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 ABCB11O95342 1321 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 USP17L10C9JJH3 530 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 SHBGP04278 402 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 NOVP48745 357 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 COBLL1Q53SF7 1204 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 TMC3Q7Z5M5 1100 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 ELAC2Q9BQ52 826 aaKnown RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 QSER1Q2KHR3 1735 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 ZNF646O15015 1829 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 BUB1BO60566 1050 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 MMEP08473 750 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 CASP5P51878 434 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 PREPLQ4J6C6 727 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-230ENST00000552960 ZCWPW2Q504Y3 356 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 TMEM59LQ9UK28 342 aa13.41□□□□□ -0.26
HDAC7-230ENST00000552960 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 TMEM110-MUSTN1A8MSY1 372 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 GH2P01242 217 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
HDAC7-230ENST00000552960 CHN1P15882 459 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC7-230ENST00000552960 CCDC38Q502W7 563 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 IRF2BP2Q7Z5L9 587 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 CCDC25Q86WR0 208 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 ADGRF4Q8IZF3 695 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 GMLQ99445 158 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 PI4KBQ9UBF8 816 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 AMFRQ9UKV5 643 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 SIPA1L1O43166 1804 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 F8VZ95 297 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 NFKBIEO00221 500 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 TATDN2Q93075 761 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 GANQ9H2C0 597 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 MCM8Q9UJA3 840 aa13.4□□□□□ -0.26
HDAC7-230ENST00000552960 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 GNA14O95837 355 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 ECE1P42892 770 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 DRP2Q13474 957 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 RBM46Q8TBY0 533 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 XPO6Q96QU8 1125 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 MYH7BA7E2Y1 1941 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms