RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SYNRGQ9UMZ2 1314 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 NFKBIEO00221 500 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ZNF185O15231 689 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 FOXN1O15353 648 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PJA2O43164 708 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CPNE3O75131 537 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PEX11AO75192 247 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 E2F6O75461 281 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 P4HBP07237 508 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CCNB1P14635 433 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 TCP1P17987 556 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 IBSPP21815 317 aaPredicted RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CALB2P22676 271 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 HNRNPH3P31942 346 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KIF5BP33176 963 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KRT9P35527 623 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SNRPNP63162 240 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KCNJ2P63252 427 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KRT83P78385 493 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 MXRA7P84157 204 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 TMEM62Q0P6H9 643 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 MPP3Q13368 585 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 MYBPC2Q14324 1141 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 POSTNQ15063 836 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 TAF11Q15544 211 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 TSNAXIP1Q2TAA8 658 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KBTBD12Q3ZCT8 623 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 USH1GQ495M9 461 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 TNFAIP8L3Q5GJ75 292 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 BEND3Q5T5X7 828 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KCTD16Q68DU8 428 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PSAPL1Q6NUJ1 521 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ADAMTSL4Q6UY14 1074 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 C3orf62Q6ZUJ4 267 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 C8orf86Q6ZUL3 223 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 HDGFL2Q7Z4V5 671 aaPredicted RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM114A1Q8IWE2 563 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ARHGAP18Q8N392 663 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ZBTB8BQ8NAP8 495 aaPredicted RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ASAP3Q8TDY4 903 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SNRNP27Q8WVK2 155 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 C17orf50Q8WW18 174 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ATXN2LQ8WWM7 1075 aaKnown RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CASKIN2Q8WXE0 1202 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 RSPH1Q8WYR4 309 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 GATA6Q92908 595 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PMEPA1Q969W9 287 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CHMP6Q96FZ7 201 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 C8orf76Q96K31 380 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 NDNQ99608 321 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 LACRTQ9GZZ8 138 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 UBA5Q9GZZ9 404 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 ADAM7Q9H2U9 754 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 THAP9Q9H5L6 903 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PCDH18Q9HCL0 1135 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PREBQ9HCU5 417 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 INCENPQ9NQS7 918 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 PRDM6Q9NQX0 595 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 LATS2Q9NRM7 1088 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 SPATA7Q9P0W8 599 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 KCNH3Q9ULD8 1083 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 BARX2Q9UMQ3 279 aaPredicted RBP5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CAPN11Q9UMQ6 739 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 MAPK8IP1Q9UQF2 711 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
LSM3P2-201ENST00000551246 UTYO14607 1347 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 WDR19Q8NEZ3 1342 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 EDC4Q6P2E9 1401 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GRID2IPA4D2P6 1211 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 M0R082 166 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ENC1O14682 589 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PLSCR1O15162 318 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 USO1O60763 962 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 MBD4O95243 580 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GJB6O95452 261 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 POLR3DP05423 398 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GLI1P08151 1106 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 VIL1P09327 827 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TPBGLP0DKB5 382 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ATP2A2P16615 1042 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 EIF2AK2P19525 551 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ALAS2P22557 587 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 CDC25CP30307 473 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GJA8P48165 433 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 CARSP49589 748 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 COPB1P53618 953 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 BPIFB4P59827 614 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ATP11AP98196 1134 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 OCRLQ01968 901 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PLOD1Q02809 727 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 KLC1Q07866 573 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 COL19A1Q14993 1142 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 KRT31Q15323 416 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms