RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 TMEM173Q86WV6 379 aaPredicted RBP7.85□□□□□ -1.15
LIN7A-202ENST00000549417 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
LIN7A-202ENST00000549417 RPP25Q9BUL9 199 aaKnown RBP7.85□□□□□ -1.15
LIN7A-202ENST00000549417 MAF1Q9H063 256 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 TMEM117Q9H0C3 514 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 ZBP1Q9H171 429 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 JMJD4Q9H9V9 463 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 C1orf112Q9NSG2 853 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 CIZ1Q9ULV3 898 aaPredicted RBP7.85□□□□□ -1.15
LIN7A-202ENST00000549417 ST3GAL5Q9UNP4 418 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 SQORQ9Y6N5 450 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 ITPR1Q14643 2758 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 DOCK8Q8NF50 2099 aa7.85□□□□□ -1.15
LIN7A-202ENST00000549417 KANSL1LA0AUZ9 987 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 PPP1R11O60927 126 aaPredicted RBP7.84□□□□□ -1.15
LIN7A-202ENST00000549417 RAB11FIP3O75154 756 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 SSBP05455 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
LIN7A-202ENST00000549417 KLRC2P26717 231 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 BCAR1P56945 870 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 STARD6P59095 220 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 BMS1Q14692 1282 aaKnown RBP7.84□□□□□ -1.15
LIN7A-202ENST00000549417 WTAPQ15007 396 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 GNPTABQ3T906 1256 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 VPS53Q5VIR6 699 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 SIRT2Q8IXJ6 389 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 ABI1Q8IZP0 508 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 LRRC43Q8N309 656 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 ECHDC1Q9NTX5 307 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 TMEM161AQ9NX61 479 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 ERAP1Q9NZ08 941 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 EPS15L1Q9UBC2 864 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 NUMBLQ9Y6R0 609 aa7.84□□□□□ -1.15
LIN7A-202ENST00000549417 MYH15Q9Y2K3 1946 aa7.84□□□□□ -1.16
LIN7A-202ENST00000549417 FREM2Q5SZK8 3169 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 CLUHO75153 1309 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 CCDC195A0A1B0GUA6 201 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 GSTTP1A0A1W2PQM5 241 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 CYSRT1A8MQ03 144 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 FIBPO43427 364 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 ALDH7A1P49419 539 aaKnown RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 HAND2P61296 217 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 GPC5P78333 572 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 PLCB4Q15147 1175 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 MLF2Q15773 248 aaPredicted RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 CCDC6Q16204 474 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 CLLU1OSQ5K130 101 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 LAIR1Q6GTX8 287 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 GET4Q7L5D6 327 aaPredicted RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 KDF1Q8NAX2 398 aaPredicted RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 HELQQ8TDG4 1101 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 DDX1Q92499 740 aaKnown RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 NELL1Q92832 810 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 BORCS6Q96GS4 357 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 TMEM169Q96HH4 297 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 SHDQ96IW2 340 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 INPP4AQ96PE3 977 aaPredicted RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 MYL10Q9BUA6 226 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 AMNQ9BXJ7 453 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 WDR6Q9NNW5 1121 aaKnown RBP7.83□□□□□ -1.16
LIN7A-202ENST00000549417 MAN1C1Q9NR34 630 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 SLC2A4RGQ9NR83 387 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 TCP11L1Q9NUJ3 509 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 ANAPC4Q9UJX5 808 aa7.83□□□□□ -1.16
LIN7A-202ENST00000549417 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 GCOM1H8Y6P7 765 aaPredicted RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 TAF4O00268 1085 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 MAST4O15021 2626 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 ATP9AO75110 1047 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 ZC3H11AO75152 810 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 RFPL2O75678 378 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 TOP3BO95985 862 aaKnown RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 RETP07949 1114 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 FGRP09769 529 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 POLR2MP0CAP2 368 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 CTSAP10619 480 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 RBM25P49756 843 aaKnown RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 CLCN4P51793 760 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 FAM189BP81408 668 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 FOXC1Q12948 553 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 SRSF5Q13243 272 aaKnown RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 HTR4Q13639 388 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 SF3A2Q15428 464 aaKnown RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 CSRP2Q16527 193 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 AASDHQ4L235 1098 aaPredicted RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 SLC44A4Q53GD3 710 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 FAM228AQ86W67 206 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 PNMA1Q8ND90 353 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 PANK1Q8TE04 598 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 BCL7CQ8WUZ0 217 aaPredicted RBP7.82□□□□□ -1.16
LIN7A-202ENST00000549417 SEPT1Q8WYJ6 367 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 STAMQ92783 540 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 MAP4K1Q92918 833 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 OSMRQ99650 979 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 OCEL1Q9H607 264 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 RXFP3Q9NSD7 469 aa7.82□□□□□ -1.16
LIN7A-202ENST00000549417 PCDHA2Q9Y5H9 948 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms