RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 MYH11P35749 1972 aa18.1■□□□□ 0.49
LIMS2-217ENST00000545738 GOLGA6L4A6NEF3 574 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 CHRNA1P02708 482 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 CKBP12277 381 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 ARL2P36404 184 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 FAM160A1Q05DH4 1040 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 MGAT3Q09327 533 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 TAF2Q6P1X5 1199 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 GPT2Q8TD30 523 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 DNAJC19Q96DA6 116 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 CCDC43Q96MW1 224 aaKnown RBP18.09■□□□□ 0.49
LIMS2-217ENST00000545738 REEP2Q9BRK0 252 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 PPME1Q9Y570 386 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 SFI1A8K8P3 1242 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 HIP1RO75146 1068 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 GPR32O75388 356 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 SLFN14P0C7P3 912 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 PRR29P0C7W0 189 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 CYP2C18P33260 490 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 THPOP40225 353 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 RGS19P49795 217 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 RBL2Q08999 1139 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 GIT2Q14161 759 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 DYMQ7RTS9 669 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 RPAINQ86UA6 219 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 TMEM40Q8WWA1 233 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 PRPF31Q8WWY3 499 aaKnown RBP18.09■□□□□ 0.49
LIMS2-217ENST00000545738 POLR3FQ9H1D9 316 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-217ENST00000545738 PRDM5Q9NQX1 630 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-217ENST00000545738 TMEM39AQ9NV64 488 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
LIMS2-217ENST00000545738 TLR3O15455 904 aaKnown RBP18.08■□□□□ 0.48
LIMS2-217ENST00000545738 SYN1P17600 705 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 GLRA2P23416 452 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 GUCY2CP25092 1073 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 MCM4P33991 863 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 AFMP43652 599 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 KIZQ2M2Z5 673 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 FAM102BQ5T8I3 360 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 KRBA2Q6ZNG9 492 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 DDX12PQ92771 950 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 PAGE5Q96GU1 130 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 SCLYQ96I15 445 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 BLZF1Q9H2G9 400 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 HIPK3Q9H422 1215 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
LIMS2-217ENST00000545738 AKT3Q9Y243 479 aa18.08■□□□□ 0.48
LIMS2-217ENST00000545738 ADGRA3Q8IWK6 1321 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 KIAA0355O15063 1070 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 CUL4BQ13620 913 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 CAPSQ13938 189 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 RHPN2Q8IUC4 686 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 ERCC4Q92889 916 aaPredicted RBP18.07■□□□□ 0.48
LIMS2-217ENST00000545738 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 TRIM9Q9C026 710 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 ADAMTS10Q9H324 1103 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 DACT1Q9NYF0 836 aa18.07■□□□□ 0.48
LIMS2-217ENST00000545738 EVI5O60447 810 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 CSDE1O75534 798 aaKnown RBP18.06■□□□□ 0.48
LIMS2-217ENST00000545738 GPC3P51654 580 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 CCL23P55773 120 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 NLRP11P59045 1033 aaKnown RBP18.06■□□□□ 0.48
LIMS2-217ENST00000545738 MDM2Q00987 491 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-217ENST00000545738 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 MCPH1Q8NEM0 835 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 DPF3Q92784 378 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 KIFC3Q9BVG8 833 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 CUEDC2Q9H467 287 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 ZMYND8Q9ULU4 1186 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-217ENST00000545738 COL4A3BPQ9Y5P4 624 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 CDY2AQ9Y6F7 541 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 MRPS6P82932 125 aaKnown RBP18.06■□□□□ 0.48
LIMS2-217ENST00000545738 IER5Q5VY09 327 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 FIZ1Q96SL8 496 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 OSMRQ99650 979 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 GINS2Q9Y248 185 aa18.06■□□□□ 0.48
LIMS2-217ENST00000545738 A0A087WZ62 844 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 NBNO60934 754 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 IQCF3P0C7M6 154 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 TMOD1P28289 359 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 ZNF131P52739 623 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 TCTN1Q2MV58 587 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 CNNM3Q8NE01 707 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
LIMS2-217ENST00000545738 NLRP4Q96MN2 994 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 FDXACB1Q9BRP7 624 aaPredicted RBP18.05■□□□□ 0.48
LIMS2-217ENST00000545738 FGFBP2Q9BYJ0 223 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 KCND2Q9NZV8 630 aa18.05■□□□□ 0.48
LIMS2-217ENST00000545738 FRMD3A2A2Y4 597 aa18.04■□□□□ 0.48
LIMS2-217ENST00000545738 GAS2O43903 313 aaKnown RBP18.04■□□□□ 0.48
LIMS2-217ENST00000545738 LRRC8DQ7L1W4 858 aa18.04■□□□□ 0.48
LIMS2-217ENST00000545738 CEP57L1Q8IYX8 460 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms