RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 H2AFZP0C0S5 128 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 ZBTB48P10074 688 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-208ENST00000544327 MATR3P43243 847 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■■■□□ 16.5
SCARB1-208ENST00000544327 LMAN1P49257 510 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 PADI6Q6TGC4 694 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 H2AFVQ71UI9 128 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 IFT20Q8IY31 132 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 BANK1Q8NDB2 785 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 TPCN2Q8NHX9 752 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 TAF4BQ92750 862 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 SYT11Q9BT88 431 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 ZNF341Q9BYN7 854 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 IKZF4Q9H2S9 585 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 AGO4Q9HCK5 861 aaKnown RBP19.32■□□□□ 0.68
SCARB1-208ENST00000544327 KCNH7Q9NS40 1196 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 WNT10BO00744 389 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 RPS6KA5O75582 802 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 DPEP1P16444 411 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 LMNB1P20700 586 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 SLC7A5Q01650 507 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 GJB7Q6PEY0 223 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 SND1Q7KZF4 910 aaKnown RBP eCLIP19.31■□□□□ 0.686e-10■■■■□ 26.6
SCARB1-208ENST00000544327 USP38Q8NB14 1042 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 ACTRT1Q8TDG2 376 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 LMBR1Q8WVP7 490 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 HOOK2Q96ED9 719 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 PNMA2Q9UL42 364 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 NCANO14594 1321 aa19.31■□□□□ 0.68
SCARB1-208ENST00000544327 GOLGA6BA6NDN3 693 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 EVI5O60447 810 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 GGCXP38435 758 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 TKFCQ3LXA3 575 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 KSR1Q8IVT5 923 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 TIPINQ9BVW5 301 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 GPR88Q9GZN0 384 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 TMEM206Q9H813 350 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 STXBP5LQ9Y2K9 1186 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 FER1L6Q2WGJ9 1857 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 NFIBO00712 420 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CCDC172P0C7W6 258 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 ACTN2P35609 894 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CYP2J2P51589 502 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 MCCD1P59942 119 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 SNRPFP62306 86 aaKnown RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CXCL9Q07325 125 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 BFSP1Q12934 665 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CBWD6Q4V339 395 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CBWD3Q5JTY5 395 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 CBWD5Q5RIA9 395 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 ALS2CLQ60I27 953 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 SYCE1Q8N0S2 351 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 IL31RAQ8NI17 732 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 LNX1Q8TBB1 728 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 AFAP1L1Q8TED9 768 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 VTI1AQ96AJ9 217 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 SH3GL2Q99962 352 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 FAM204AQ9H8W3 233 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 LARSQ9P2J5 1176 aaKnown RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-208ENST00000544327 DNAJC12Q9UKB3 198 aa19.3■□□□□ 0.68
SCARB1-208ENST00000544327 MAPK13O15264 365 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 HNRNPH2P55795 449 aaKnown RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 TNNC1P63316 161 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 MYL7Q01449 175 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 ITGB3BPQ13352 177 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 DRAP1Q14919 205 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 EIF1ADQ8N9N8 165 aaKnown RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 CALR3Q96L12 384 aaKnown RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 GDAP1L1Q96MZ0 367 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 TBC1D22BQ9NU19 505 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 APEX2Q9UBZ4 518 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 PACSIN2Q9UNF0 486 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-208ENST00000544327 ZHX2Q9Y6X8 837 aa19.29■□□□□ 0.68
SCARB1-208ENST00000544327 K7ENM7 598 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 P4HA2O15460 535 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 NOP2P46087 812 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 RARRES1P49788 294 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 MRPS9P82933 396 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 NBPF9Q3BBW0 867 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 SYTL5Q8TDW5 730 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■■■ 48.7
SCARB1-208ENST00000544327 MYOZ2Q9NPC6 264 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 EXOC3O60645 756 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 PHACTR2O75167 634 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 HEXIM1O94992 359 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 GLI1P08151 1106 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 TMEM253P0C7T8 217 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 PLS3P13797 630 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 QARSP47897 775 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 PAK2Q13177 524 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 INTS8Q75QN2 995 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 SYCP3Q8IZU3 236 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 RASGEF1CQ8N431 466 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms