RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 COLGALT1Q8NBJ5 622 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 ADAM2Q99965 735 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 TM6SF1Q9BZW5 370 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 ERVK-5Q9HDB9 667 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
GABPB1-206ENST00000543881 GINS2Q9Y248 185 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 COL1A2P08123 1366 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 MYO10Q9HD67 2058 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 MSH4O15457 936 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 NPY5RQ15761 445 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 ZNF484Q5JVG2 852 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 SLC24A5Q71RS6 500 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
GABPB1-206ENST00000543881 KREMEN2Q8NCW0 462 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 GJA10Q969M2 543 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 ZNF274Q96GC6 653 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-206ENST00000543881 AIFM3Q96NN9 605 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 SH3GLB2Q9NR46 395 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 RGS18Q9NS28 235 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 C1orf112Q9NSG2 853 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-206ENST00000543881 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
GABPB1-206ENST00000543881 C9IYK1 514 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 M0R2N6 131 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 RPS6KA5O75582 802 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 C22orf31O95567 290 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 LAG3P18627 525 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 NLRP5P59047 1200 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 STK3Q13188 491 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 MTMR3Q13615 1198 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 UBALD2Q8IYN6 164 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 MRPS27Q92552 414 aaKnown RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 TCF25Q9BQ70 676 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 CWH43Q9H720 699 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 SORCS3Q9UPU3 1222 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 LZTS1Q9Y250 596 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
GABPB1-206ENST00000543881 NR2E1Q9Y466 385 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 EVPLQ92817 2033 aa13.41□□□□□ -0.26
GABPB1-206ENST00000543881 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 ZNF862O60290 1169 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 DTNBO60941 627 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 BRD1O95696 1058 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 PSAPP07602 524 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 FGFR1P11362 822 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
GABPB1-206ENST00000543881 USP11P51784 963 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 UGCGQ16739 394 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 ODR4Q5SWX8 454 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 TBCKQ8TEA7 893 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 NGRNQ9NPE2 291 aaKnown RBP13.4□□□□□ -0.26
GABPB1-206ENST00000543881 ENTPD7Q9NQZ7 604 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
GABPB1-206ENST00000543881 MYO15AQ9UKN7 3530 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 MYH9P35579 1960 aaKnown RBP13.39□□□□□ -0.27
GABPB1-206ENST00000543881 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 HIDE1A8MVS5 230 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 GPR182O15218 404 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 DEXIO95424 95 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 VTNP04004 478 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 NBL1P41271 181 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 KIZQ2M2Z5 673 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 SLC5A5Q92911 643 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 POMKQ9H5K3 350 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 ATP6V0A4Q9HBG4 840 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 DISC1Q9NRI5 854 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 PDRG1Q9NUG6 133 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 WDR81Q562E7 1941 aa13.39□□□□□ -0.27
GABPB1-206ENST00000543881 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 CPLX1O14810 134 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 GPR32O75388 356 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 TDP2O95551 362 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 CLCN3P51790 818 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 SCRN1Q12765 414 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms