RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MLXIPQ9HAP2 919 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 ATP6V0A4Q9HBG4 840 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 PPME1Q9Y570 386 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 MCM3APO60318 1980 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 RBM47A0AV96 593 aaKnown RBP10.25□□□□□ -0.77
GNE-206ENST00000543356 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 LGR5O75473 907 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 ATP4AP20648 1035 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 INHBEP58166 350 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 FAM102BQ5T8I3 360 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 FRMD5Q7Z6J6 570 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 RETREG2Q8NC44 543 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 SPIRE2Q8WWL2 714 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 GPR20Q99678 358 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 NUP58Q9BVL2 599 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 TMEM206Q9H813 350 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 FAM184BQ9ULE4 1060 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 SIP14410 1827 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
GNE-206ENST00000543356 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.77
GNE-206ENST00000543356 FECHP22830 423 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 TCF7P36402 384 aaPredicted RBP10.25□□□□□ -0.77
GNE-206ENST00000543356 ADKP55263 362 aaKnown RBP10.25□□□□□ -0.77
GNE-206ENST00000543356 GTF2BQ00403 316 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 PPP2R3AQ06190 1150 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 KCNA1Q09470 495 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 MYBPC2Q14324 1141 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 FIGNQ5HY92 759 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 MAEAQ7L5Y9 396 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 HS2ST1Q7LGA3 356 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 CNPY4Q8N129 248 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 SH2D3AQ9BRG2 576 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 NAA15Q9BXJ9 866 aaKnown RBP10.25□□□□□ -0.77
GNE-206ENST00000543356 GBP3Q9H0R5 595 aa10.25□□□□□ -0.77
GNE-206ENST00000543356 STX10O60499 249 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 CASP14P31944 242 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 FXR1P51114 621 aaKnown RBP eCLIP10.24□□□□□ -0.77
GNE-206ENST00000543356 SNRPFP62306 86 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 DMP1Q13316 513 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 SYCP1Q15431 976 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 TAF3Q5VWG9 929 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 SLC9A9Q8IVB4 645 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 C17orf53Q8N3J3 647 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 ACCSQ96QU6 501 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 BAG1Q99933 345 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 TTYH3Q9C0H2 523 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 KATNBL1Q9H079 304 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 GPRC5CQ9NQ84 441 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 XPNPEP1Q9NQW7 623 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 FAM155AB1AL88 458 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 ARHGAP6O43182 974 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 TXNP10599 105 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 SCP2P22307 547 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 ABCD1P33897 745 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 RFC5P40937 340 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 STAT5BP51692 787 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 SMTNP53814 917 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 EMC2Q15006 297 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 PLPPR4Q7Z2D5 763 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 HAUS6Q7Z4H7 955 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 C12orf56Q8IXR9 622 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 KCNN1Q92952 543 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 HHIPL1Q96JK4 782 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 CEP89Q96ST8 783 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 NTPCRQ9BSD7 190 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 DHX33Q9H6R0 707 aaKnown RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 AZI2Q9H6S1 392 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 DMAC2Q9NW81 257 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
GNE-206ENST00000543356 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 SIK3Q9Y2K2 1263 aa10.24□□□□□ -0.77
GNE-206ENST00000543356 A0A1W2PQJ5 194 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 EPB41P11171 864 aaKnown RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 NPTX2P47972 431 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 SLC26A2P50443 739 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 PEX3P56589 373 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 SREBF2Q12772 1141 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 TARBP2Q15633 366 aaKnown RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 DPP9Q86TI2 863 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 SMC1BQ8NDV3 1235 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms