RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CCDC38Q502W7 563 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 LRIG3Q6UXM1 1119 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 PPP1R21Q6ZMI0 780 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 CTAGE3PQ8IX95 158 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGAP24Q8N264 748 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 SLC35G2Q8TBE7 412 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 HVCN1Q96D96 273 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 REEP2Q9BRK0 252 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 STK33Q9BYT3 514 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 KMT5AQ9NQR1 393 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 KLC4Q9NSK0 619 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 CLRN2A0PK11 232 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 FAM107AO95990 144 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PEX3P56589 373 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 DHX34Q14147 1143 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 KLHDC7AQ5VTJ3 777 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 CCDC137Q6PK04 289 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 CREG2Q8IUH2 290 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 MSL3Q8N5Y2 521 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 MRPL47Q9HD33 250 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 TMOD4Q9NZQ9 345 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 RNF225M0QZC1 329 aaPredicted RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 GLI1P08151 1106 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 RPA1P27694 616 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 TMOD1P28289 359 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 AARSP49588 968 aaKnown RBP eCLIP8.83□□□□□ -1
PRKAB1-207ENST00000542698 WDR59Q6PJI9 974 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PADI6Q6TGC4 694 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PHLDB2Q86SQ0 1253 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 RPUSD2Q8IZ73 545 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 GDAP1Q8TB36 358 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 TSNARE1Q96NA8 513 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 INTS2Q9H0H0 1204 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 CNOT8Q9UFF9 292 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 STRCQ7RTU9 1775 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 CYP11B2P19099 503 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 VAMP7P51809 220 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PRELPP51888 382 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 ACTN3Q08043 901 aaPredicted RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 BRDTQ58F21 947 aaPredicted RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 KIAA1755Q5JYT7 1200 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 SLC10A5Q5PT55 438 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 METTL13Q8N6R0 699 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 CEP170P1Q96L14 293 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 FAM81BQ96LP2 452 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 TLR10Q9BXR5 811 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 AZI2Q9H6S1 392 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 ANAPC7Q9UJX3 599 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 SERPINA10Q9UK55 444 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PDE2AO00408 941 aaPredicted RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 WNT7AO00755 349 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 CIB2O75838 187 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 STAMBPO95630 424 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 KRT19P08727 400 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 HADHQ16836 314 aaKnown RBP8.83□□□□□ -1
PRKAB1-207ENST00000542698 GNPTABQ3T906 1256 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PAF1Q8N7H5 531 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PICK1Q9NRD5 415 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PCDHB4Q9Y5E5 795 aa8.83□□□□□ -1
PRKAB1-207ENST00000542698 PFASO15067 1338 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 LRRIQ4A6NIV6 560 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 WTIPA6NIX2 430 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 I3L4J1 428 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TBX3O15119 743 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 CYTH3O43739 400 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 MYBP10242 640 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 FUT2Q10981 343 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 DRP2Q13474 957 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 PTGISQ16647 500 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 TRIM68Q6AZZ1 485 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 PODNQ7Z5L7 613 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 LINC00116Q8NCU8 138 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 CASKIN2Q8WXE0 1202 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 ATP6V0A1Q93050 837 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TRIM51Q9BSJ1 452 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 PITPNM3Q9BZ71 974 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 SUGT1Q9Y2Z0 365 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 EXOC1LA0A1B0GW35 172 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 SLC16A3O15427 465 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 HSD17B3P37058 310 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 PIK3CAP42336 1068 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 FMO5P49326 533 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TMED2Q15363 201 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TBC1D16Q8TBP0 767 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 N4BP2L2Q92802 583 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 CFAP57Q96MR6 1250 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 SUCLA2Q9P2R7 463 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 LCMT1Q9UIC8 334 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 RIC1Q4ADV7 1423 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 FRMD3A2A2Y4 597 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms