RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ABCG1P45844 678 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 RAP1GAPP47736 663 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCT4P50991 539 aaKnown RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 PLCD1P51178 756 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CACNB3P54284 484 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 WDR5P61964 334 aaKnown RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TDGQ13569 410 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 GRB14Q14449 540 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCDC152Q4G0S7 254 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 DAB2IPQ5VWQ8 1189 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCSAPQ6IQ19 270 aaPredicted RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 KIAA1211LQ6NV74 962 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TMCO2Q7Z6W1 182 aaPredicted RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ANKRD18AQ8IVF6 992 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TMEM192Q8IY95 271 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZDHHC14Q8IZN3 488 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 RETREG2Q8NC44 543 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 PI4K2BQ8TCG2 481 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ASAP3Q8TDY4 903 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 OSMRQ99650 979 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 PAGR1Q9BTK6 254 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 MYL10Q9BUA6 226 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 SIL1Q9H173 461 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 RC3H2Q9HBD1 1191 aaKnown RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CD209Q9NNX6 404 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 HSPBP1Q9NZL4 362 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 DLGAP2Q9P1A6 1054 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 DBF4Q9UBU7 674 aaPredicted RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 WNT16Q9UBV4 365 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 VAV3Q9UKW4 847 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TTF2Q9UNY4 1162 aaKnown RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 LRRFIP2Q9Y608 721 aaKnown RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 NIPBLQ6KC79 2804 aaeCLIP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 SIP14410 1827 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 SMCHD1A6NHR9 2005 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 CACNA1EQ15878 2313 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 KIAA1217Q5T5P2 1943 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TEX51A0A1B0GUA7 166 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 ABHD14A-ACY1A0A1B0GW23 586 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 FSD2A1L4K1 749 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 C2CD4DB7Z1M9 353 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 WDR46O15213 610 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TREHO43280 583 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CTNND1O60716 968 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 LGR5O75473 907 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CABYRO75952 493 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 SLFN14P0C7P3 912 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF806P0C7X5 589 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 C6P13671 934 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 HSP90B1P14625 803 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 MYL6BP14649 208 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CSRP1P21291 193 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CST5P28325 142 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CRKP46108 304 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 HMGCS2P54868 508 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TNFAIP2Q03169 654 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 PRKCQQ04759 706 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 SPP2Q13103 211 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 AP3B2Q13367 1082 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 AAMPQ13685 434 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 IFI16Q16666 785 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF792Q3KQV3 632 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 C8orf34Q49A92 452 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TAF1BQ53T94 588 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 PHLDB3Q6NSJ2 640 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 OGFOD3Q6PK18 319 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZC3H18Q86VM9 953 aaKnown RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 SIAH1Q8IUQ4 282 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 SLC43A3Q8NBI5 491 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 C2CD4AQ8NCU7 369 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 IL17REQ8NFR9 667 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 BCL7CQ8WUZ0 217 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 FAM151AQ8WW52 585 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 NELL1Q92832 810 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 WBP1Q96G27 269 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 CRELD1Q96HD1 420 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 PRIMPOLQ96LW4 560 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 C11orf84Q9BUA3 381 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 KRTAP4-9Q9BYQ8 210 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 BCO2Q9BYV7 579 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 BHLHE41Q9C0J9 482 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TRPV6Q9H1D0 765 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 TBC1D17Q9HA65 648 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 PIDD1Q9HB75 910 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 KANSL3Q9P2N6 904 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 BARX2Q9UMQ3 279 aaPredicted RBP2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 AP4E1Q9UPM8 1137 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 RABGAP1Q9Y3P9 1069 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
TRAV1-1-201ENST00000542354 FBN1P35555 2871 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 LRRC10BA6NIK2 292 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 SHISA7A6NL88 538 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 F5H6K3 240 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 TNFRSF10BO14763 440 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 B4GALT4O60513 344 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 PAPLNO95428 1278 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 C6orf222P0C671 652 aaPredicted RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 IQCF3P0C7M6 154 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 SRGAP2BP0DMP2 458 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 FUT4P22083 530 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms