RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CLP1Q92989 425 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 PPP1R16BQ96T49 567 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 C17orf80Q9BSJ5 609 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 C1orf112Q9NSG2 853 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 C9IYK1 514 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 GTPBP6O43824 516 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 GAS2O43903 313 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 RFC5P40937 340 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 FAM189BP81408 668 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 CTTNQ14247 550 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 EPC2Q52LR7 807 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 SLC24A5Q71RS6 500 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 ZNF410Q86VK4 478 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 SLC7A3Q8WY07 619 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 CEP170P1Q96L14 293 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 ADAM2Q99965 735 aa19.24■□□□□ 0.67
SFSWAP-205ENST00000537164 KIAA1671Q9BY89 1806 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 C5orf67F2Z3F1 127 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 CYP4A11Q02928 519 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 TPH2Q8IWU9 490 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 TMEM192Q8IY95 271 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 CMTR2Q8IYT2 770 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 FIBCD1Q8N539 461 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 C4orf32Q8N8J7 132 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 FBXO22Q8NEZ5 403 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 ELAC1Q9H777 363 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 ANKEF1Q9NU02 776 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 SUCLA2Q9P2R7 463 aaPredicted RBP19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 MTUS1Q9ULD2 1270 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 NOL7Q9UMY1 257 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 RWDD3Q9Y3V2 267 aa19.23■□□□□ 0.67
SFSWAP-205ENST00000537164 DENND3A2RUS2 1198 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 POTEMA6NI47 508 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 H3BNC9 293 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 ZBTB39O15060 712 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 OR52Z1P0C646 297 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 XRCC6P12956 609 aaKnown RBP eCLIP19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 ATP2B1P20020 1258 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 GJB2P29033 226 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 TOB1P50616 345 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 ZNF174Q15697 407 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 GDPD5Q8WTR4 605 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 NLRP7Q8WX94 980 aa19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 GCOM2Q9BZD3 368 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-205ENST00000537164 A0A087WZ62 844 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 RB1P06400 928 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 SPATA31C1P0DKV0 1188 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 POLGP54098 1239 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 BTG3Q14201 252 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 XKR9Q5GH70 373 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 RHPN2Q8IUC4 686 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 FDXACB1Q9BRP7 624 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 POLR3CQ9BUI4 534 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 INO80BQ9C086 356 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 TUFT1Q9NNX1 390 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 TMEM161AQ9NX61 479 aa19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-205ENST00000537164 BMPR1AP36894 532 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 FXR2P51116 673 aaKnown RBP eCLIP19.2■□□□□ 0.664e-8■■■■■ 35.7
SFSWAP-205ENST00000537164 CUL4AQ13619 759 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 CCDC85BQ15834 202 aaPredicted RBP19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 TCP11Q8WWU5 503 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 PRPF31Q8WWY3 499 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 ZNF668Q96K58 619 aaPredicted RBP19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 TRAIPQ9BWF2 469 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 CHST12Q9NRB3 414 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 PCDHB7Q9Y5E2 793 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 COL4A3BPQ9Y5P4 624 aa19.2■□□□□ 0.66
SFSWAP-205ENST00000537164 ATG2AQ2TAZ0 1938 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 LAD1O00515 517 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 ASAP2O43150 1006 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 ZSCAN20P17040 1043 aaPredicted RBP19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 MUTP22033 750 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 RPA1P27694 616 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 TECP42680 631 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 RARRES1P49788 294 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 EMC2Q15006 297 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 CATSPER3Q86XQ3 398 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 KSR1Q8IVT5 923 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 PSPC1Q8WXF1 523 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 PPM1EQ8WY54 764 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 SCLT1Q96NL6 688 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 PLVAPQ9BX97 442 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 XPNPEP1Q9NQW7 623 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 LRFN2Q9ULH4 789 aa19.19■□□□□ 0.66
SFSWAP-205ENST00000537164 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 DGAT1O75907 488 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 LAMTOR4Q0VGL1 99 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 PDIA5Q14554 519 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 NBR1Q14596 966 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 IGSF22Q8N9C0 903 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 ATXN2LQ8WWM7 1075 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 P2RX5Q93086 422 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 TMEM143Q96AN5 459 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms