RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 KLHDC7AQ5VTJ3 777 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 CYFIP2Q96F07 1278 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 EIF2AK1Q9BQI3 630 aaKnown RBP19.52■□□□□ 0.71
RAB40C-203ENST00000535977 ZNF233A6NK53 670 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 EIF3DO15371 548 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAB40C-203ENST00000535977 XRCC5P13010 732 aaKnown RBP19.51■□□□□ 0.71
RAB40C-203ENST00000535977 SLC15A2Q16348 729 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 TBC1D5Q92609 795 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 RSRC1Q96IZ7 334 aaKnown RBP19.51■□□□□ 0.71
RAB40C-203ENST00000535977 TLR10Q9BXR5 811 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 GOPCQ9HD26 462 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 MATR3P43243 847 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAB40C-203ENST00000535977 NFIL3Q16649 462 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 IFI16Q16666 785 aaKnown RBP19.51■□□□□ 0.71
RAB40C-203ENST00000535977 ANKRD20A8PQ5CZ79 823 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 CAVIN3Q969G5 261 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 CSRNP1Q96S65 589 aa19.51■□□□□ 0.71
RAB40C-203ENST00000535977 GTPBP10A4D1E9 387 aaKnown RBP19.5■□□□□ 0.71
RAB40C-203ENST00000535977 GRID2IPA4D2P6 1211 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 TNFRSF8P28908 595 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 EXOC3L4Q17RC7 722 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 LMBR1Q8WVP7 490 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 MYH10P35580 1976 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 MEIS1O00470 390 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 EMC10Q5UCC4 262 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 CDCA2Q69YH5 1023 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-203ENST00000535977 NFRKBQ6P4R8 1299 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 MICAL1Q8TDZ2 1067 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 PARD3BQ8TEW8 1205 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 CHURC1Q8WUH1 139 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
RAB40C-203ENST00000535977 SEL1LQ9UBV2 794 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 SALL4Q9UJQ4 1053 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 PCDHGC5Q9Y5F6 944 aa19.5■□□□□ 0.71
RAB40C-203ENST00000535977 ZNF646O15015 1829 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-203ENST00000535977 CASP5P51878 434 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 SNAP25P60880 206 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 CCDC43Q96MW1 224 aaKnown RBP19.49■□□□□ 0.71
RAB40C-203ENST00000535977 SPAG5Q96R06 1193 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 UIMC1Q96RL1 719 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 BHMT2Q9H2M3 363 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 PPANQ9NQ55 473 aaKnown RBP19.49■□□□□ 0.71
RAB40C-203ENST00000535977 TMX2Q9Y320 296 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 SH3BP1Q9Y3L3 701 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 CES2O00748 559 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 PLA2G6O60733 806 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 AP1G2O75843 785 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 CCDC26Q8TAB7 109 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 TBC1D31Q96DN5 1066 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 HSD17B14Q9BPX1 270 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
RAB40C-203ENST00000535977 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
RAB40C-203ENST00000535977 TNS1Q9HBL0 1735 aaKnown RBP19.48■□□□□ 0.71
RAB40C-203ENST00000535977 IGLV3-22A0A075B6J6 115 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-203ENST00000535977 CLSTN1O94985 981 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 NR3C1P04150 777 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 PPP2R5CQ13362 524 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 KIAA0753Q2KHM9 967 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 CFAP58Q5T655 872 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 FAM133AQ8N9E0 248 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 C7orf43Q8WVR3 580 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 UBE4BO95155 1302 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 UCHL3P15374 230 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 PRKCIP41743 596 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 SCTRP47872 440 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 IFFO1Q0D2I5 559 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 AOC3Q16853 763 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 IQCKQ8N0W5 287 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 ANKRD13CQ8N6S4 541 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 HOOK2Q96ED9 719 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 PRMT6Q96LA8 375 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-203ENST00000535977 STIM2Q9P246 746 aa19.48■□□□□ 0.71
RAB40C-203ENST00000535977 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
RAB40C-203ENST00000535977 A0A1W2PRG0 241 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 BUB1O43683 1085 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 MGRN1O60291 552 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 ATP2C2O75185 946 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 GCNT3O95395 438 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 MYBP10242 640 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-203ENST00000535977 HOXD13P35453 343 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 PPARDQ03181 441 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 RINT1Q6NUQ1 792 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 OTOP1Q7RTM1 612 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 IRF2BP2Q7Z5L9 587 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 VPS36Q86VN1 386 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 ADAMTS1Q9UHI8 967 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 DAAM1Q9Y4D1 1078 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 A0A087X0T9 212 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 PALMO75781 387 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 FAM13AO94988 1023 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 FAM228BP0C875 321 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 PON1P27169 355 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 MEI1Q5TIA1 1274 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 DPY19L2P1Q6NXN4 242 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms