RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 FAM217BQ9NTX9 383 aaPredicted RBP17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 ATP8B3O60423 1300 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 C17orf102A2RUQ5 167 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 NLRP11P59045 1033 aaKnown RBP17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 NOGQ13253 232 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 LLGL1Q15334 1064 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 POLR3GO15318 223 aaPredicted RBP17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 MED7O43513 233 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 ACOT2P49753 483 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 ARRDC4Q8NCT1 418 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 GCNAQ96QF7 691 aa17.01■□□□□ 0.31
PPFIA1-222ENST00000532504 TUBB4AP04350 444 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 KRT31Q15323 416 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 LY6KQ17RY6 165 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 CCDC14Q49A88 953 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 TCP11X2Q5H9J9 407 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 RNF208Q9H0X6 261 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 ATP2A2P16615 1042 aaKnown RBP17■□□□□ 0.31
PPFIA1-222ENST00000532504 CYP4F22Q6NT55 531 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 CASC4Q6P4E1 433 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 RNF139Q8WU17 664 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 A6NJR5 290 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 CYP2C19P33261 490 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 KIAA1524Q8TCG1 905 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 ERO1AQ96HE7 468 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 IRX5P78411 483 aaPredicted RBP17■□□□□ 0.31
PPFIA1-222ENST00000532504 TSPY1Q01534 308 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 ELMSAN1Q6PJG2 1045 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 DCDC2CA8MYV0 355 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 KCNK3O14649 394 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 VAMP7P51809 220 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 GAS2L3Q86XJ1 694 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 CCDC89Q8N998 374 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 RIOX1Q9H6W3 641 aa17■□□□□ 0.31
PPFIA1-222ENST00000532504 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
PPFIA1-222ENST00000532504 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 VAV2P52735 878 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 LONRF2Q1L5Z9 754 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 ABCC6O95255 1503 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 STRNO43815 780 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 ZNF286BP0CG31 522 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 TMEM270Q6UE05 265 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 GPD1LQ8N335 351 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 TYW5A2RUC4 315 aaKnown RBP16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 INHBEP58166 350 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 C8orf74Q6P047 294 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 TRIM9Q9C026 710 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 CPB1P15086 417 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 DLK2Q6UY11 383 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 CATSPER3Q86XQ3 398 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 PIDD1Q9HB75 910 aa16.99■□□□□ 0.31
PPFIA1-222ENST00000532504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 DNAJC24Q6P3W2 148 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 MRFAP1L1Q96HT8 127 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 KIFC3Q9BVG8 833 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 ZMYND15Q9H091 742 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 PPANQ9NQ55 473 aaKnown RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 STK25O00506 426 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 VPS41P49754 854 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 CLCN3P51790 818 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 DNAJC12Q9UKB3 198 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 BZW2Q9Y6E2 419 aaKnown RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 RRN3P2A6NIE6 340 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 SHROOM1Q2M3G4 852 aaPredicted RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 ZC2HC1CQ53FD0 456 aaPredicted RBP16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 PASD1Q8IV76 773 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 BIRC2Q13490 618 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 NAALADL2Q58DX5 795 aa16.98■□□□□ 0.31
PPFIA1-222ENST00000532504 RFC5P40937 340 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 SP3Q02447 781 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 PAK2Q13177 524 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 ZNF746Q6NUN9 644 aaPredicted RBP16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 PCSK9Q8NBP7 692 aaKnown RBP16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 ZNF18P17022 549 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 SREBF1P36956 1147 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 CDC42EP1Q00587 391 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 CATSPERGQ6ZRH7 1159 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 KIF9Q9HAQ2 790 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 RPA1P27694 616 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 GLYCTKQ8IVS8 523 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 A1CFQ9NQ94 594 aaKnown RBP16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 MYMKA6NI61 221 aa16.97■□□□□ 0.31
PPFIA1-222ENST00000532504 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 275.5 ms