RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 LINC01465Q8N7H1 131 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 MCPH1Q8NEM0 835 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 DUSP9Q99956 384 aaKnown RBP15.93■□□□□ 0.14
COLCA2-202ENST00000526216 IKZF4Q9H2S9 585 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 XPNPEP3Q9NQH7 507 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 SEL1LQ9UBV2 794 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 ZNF215Q9UL58 517 aaPredicted RBP15.93■□□□□ 0.14
COLCA2-202ENST00000526216 PPME1Q9Y570 386 aa15.93■□□□□ 0.14
COLCA2-202ENST00000526216 MYH11P35749 1972 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 COL1A2P08123 1366 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 ZMYM2Q9UBW7 1377 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 ADGRA3Q8IWK6 1321 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 IKBKBO14920 756 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 PRPF6O94906 941 aaKnown RBP15.92■□□□□ 0.14
COLCA2-202ENST00000526216 CCNE1P24864 410 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 IGBP1P78318 339 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 MYL5Q02045 173 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 PAK1Q13153 545 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 BMT2Q1RMZ1 405 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 ZC2HC1CQ53FD0 456 aaPredicted RBP15.92■□□□□ 0.14
COLCA2-202ENST00000526216 ODR4Q5SWX8 454 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 MARCH8Q5T0T0 291 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 TTI2Q6NXR4 508 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 KSR1Q8IVT5 923 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 LRRC71Q8N4P6 559 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 ENOX1Q8TC92 643 aaKnown RBP15.92■□□□□ 0.14
COLCA2-202ENST00000526216 GTPBP4Q9BZE4 634 aaKnown RBP15.92■□□□□ 0.14
COLCA2-202ENST00000526216 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
COLCA2-202ENST00000526216 RWDD2AQ9UIY3 292 aa15.92■□□□□ 0.14
COLCA2-202ENST00000526216 SMIM10L2AP0DMW4 78 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 SMIM10L2BP0DMW5 78 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 GLRA2P23416 452 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 CST5P28325 142 aaPredicted RBP15.91■□□□□ 0.14
COLCA2-202ENST00000526216 NPTX2P47972 431 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 NCKAP1LP55160 1127 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 PEX3P56589 373 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 RTP1P59025 263 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 KCNA1Q09470 495 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 TBC1D8BQ0IIM8 1120 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 PPFIA1Q13136 1202 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 GRIK4Q16099 956 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 KIAA0753Q2KHM9 967 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 ZCWPW2Q504Y3 356 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 CENPPQ6IPU0 288 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 ZNF720Q7Z2F6 126 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 NELFCDQ8IXH7 590 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 FAM178BQ8IXR5 827 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 MYOCDQ8IZQ8 938 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 PIP4P2Q8N4L2 257 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 ZNF507Q8TCN5 953 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 SLC7A3Q8WY07 619 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 KIFAP3Q92845 792 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 P2RX5Q93086 422 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
COLCA2-202ENST00000526216 KIFC3Q9BVG8 833 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 KCTD10Q9H3F6 313 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 MRPL44Q9H9J2 332 aaKnown RBP15.91■□□□□ 0.14
COLCA2-202ENST00000526216 PLSCR2Q9NRY7 297 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 SIP14410 1827 aa15.91■□□□□ 0.14
COLCA2-202ENST00000526216 GCNT3O95395 438 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 HSPA1AP0DMV8 641 aaKnown RBP15.9■□□□□ 0.14
COLCA2-202ENST00000526216 HSPA1BP0DMV9 641 aaKnown RBP15.9■□□□□ 0.14
COLCA2-202ENST00000526216 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
COLCA2-202ENST00000526216 MRE11P49959 708 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 CLCN3P51790 818 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 ADAM17P78536 824 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 UVSSAQ2YD98 709 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 SPIRE2Q8WWL2 714 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.9■□□□□ 0.148e-6■□□□□ 10.8
COLCA2-202ENST00000526216 UNC93B1Q9H1C4 597 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 HMX1Q9NP08 348 aaPredicted RBP15.9■□□□□ 0.14
COLCA2-202ENST00000526216 SETD4Q9NVD3 440 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 LARSQ9P2J5 1176 aaKnown RBP15.9■□□□□ 0.14
COLCA2-202ENST00000526216 NFE2L3Q9Y4A8 694 aa15.9■□□□□ 0.14
COLCA2-202ENST00000526216 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 K7ENM7 598 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 PSMA7O14818 248 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 EIF3DO15371 548 aaKnown RBP eCLIP15.89■□□□□ 0.13
COLCA2-202ENST00000526216 SLC16A4O15374 487 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 GJB1P08034 283 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 KLRC1P26715 233 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 HOXC8P31273 242 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 PPP1R2P41236 205 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 STIM1Q13586 685 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 CAPSQ13938 189 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 MTFR1Q15390 333 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
COLCA2-202ENST00000526216 SPATA1Q5VX52 437 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 MTHFD1LQ6UB35 978 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 CXCL17Q6UXB2 119 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 TMEM161BQ8NDZ6 487 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 LMBR1Q8WVP7 490 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
COLCA2-202ENST00000526216 ST6GALNAC4Q9H4F1 302 aa15.89■□□□□ 0.13
COLCA2-202ENST00000526216 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
COLCA2-202ENST00000526216 FANCLQ9NW38 375 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms