RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 NAGPAQ9UK23 515 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 ATXN7L1Q9ULK2 861 aaPredicted RBP4.63□□□□□ -1.67
SKP1-209ENST00000522552 TMCC3Q9ULS5 477 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 EDARQ9UNE0 448 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 PHF24Q9UPV7 400 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 F5H0A9 414 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 MASP2O00187 686 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 FOXN3O00409 490 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 IPO5O00410 1097 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 APOL1O14791 398 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 PLA2G6O60733 806 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 DKC1O60832 514 aaKnown RBP eCLIP4.62□□□□□ -1.67
SKP1-209ENST00000522552 TADA3O75528 432 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 MTHFD1P11586 935 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 BMP4P12644 408 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 HNRNPLP14866 589 aaKnown RBP eCLIP4.62□□□□□ -1.678e-9■□□□□ 9.2
SKP1-209ENST00000522552 RPL17P18621 184 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 PTX3P26022 381 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 LTBRP36941 435 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 DRG2P55039 364 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 RNF4P78317 190 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 IRF9Q00978 393 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 PLIN5Q00G26 463 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 SRSF11Q05519 484 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 FOXO1Q12778 655 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 SLBPQ14493 270 aaKnown RBP eCLIP4.62□□□□□ -1.67
SKP1-209ENST00000522552 MBTPS1Q14703 1052 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 FAM110CQ1W6H9 321 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 SLC35G1Q2M3R5 365 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 RILPL1Q5EBL4 403 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 DNAJC21Q5F1R6 531 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 FBXO47Q5MNV8 452 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 HECTD3Q5T447 861 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 ZNF385CQ66K41 422 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 GDF6Q6KF10 455 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 FSTL4Q6MZW2 842 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 PLBD1Q6P4A8 553 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 LYPD4Q6UWN0 246 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 TEX11Q8IYF3 940 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 MARCH10Q8NA82 808 aaPredicted RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 APPL2Q8NEU8 664 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 KLHDC4Q8TBB5 520 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 CCDC47Q96A33 483 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 RRP36Q96EU6 259 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 TRIM11Q96F44 468 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 RADILQ96JH8 1075 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 FAM167BQ9BTA0 163 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 XPO4Q9C0E2 1151 aaKnown RBP4.62□□□□□ -1.67
SKP1-209ENST00000522552 OBP2BQ9NPH6 170 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 PLSCR4Q9NRQ2 329 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 ODF2LQ9ULJ1 636 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 LIMCH1Q9UPQ0 1083 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 SIK3Q9Y2K2 1263 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 STXBP5LQ9Y2K9 1186 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 ST14Q9Y5Y6 855 aa4.62□□□□□ -1.67
SKP1-209ENST00000522552 SLC12A8A0AV02 714 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 GOLGA6L3A6NEY3 463 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 PGPEP1LA6NFU8 196 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 LGALS16A8MUM7 142 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 B4DLN1 442 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 F8W8V4 182 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 STXBP3O00186 592 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 C2CD2LO14523 706 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 EIF4EBP3O60516 100 aaPredicted RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 USO1O60763 962 aaKnown RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 SOAT2O75908 522 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CST3P01034 146 aaPredicted RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 GSNP06396 782 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 SLFN14P0C7P3 912 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 SLURP2P0DP57 97 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 EDNRBP24530 442 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 MMP14P50281 582 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 LACTBP83111 547 aaPredicted RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 PPP2R5CQ13362 524 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 SNW1Q13573 536 aaKnown RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 KRT32Q14532 448 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CT83Q5H943 113 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 KLHDC7AQ5VTJ3 777 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 ESRP1Q6NXG1 681 aaKnown RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 ZNF449Q6P9G9 518 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 ELMSAN1Q6PJG2 1045 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 UBE3DQ7Z6J8 389 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CPOQ8IVL8 374 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 PLBD2Q8NHP8 589 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 PANK1Q8TE04 598 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 XAGE3Q8WTP9 111 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 HTRA1Q92743 480 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 ERCC4Q92889 916 aaPredicted RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 C18orf8Q96DM3 657 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 TBC1D31Q96DN5 1066 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CCDC34Q96HJ3 373 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 KREMEN1Q96MU8 473 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CNPPD1Q9BV87 410 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 COLEC11Q9BWP8 271 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 UNKQ9C0B0 810 aaKnown RBP4.61□□□□□ -1.67
SKP1-209ENST00000522552 PRDM14Q9GZV8 571 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CCDC68Q9H2F9 335 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 PCIF1Q9H4Z3 704 aa4.61□□□□□ -1.67
SKP1-209ENST00000522552 CXorf56Q9H5V9 222 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms