RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ZNF70Q9UC06 446 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB4-201ENST00000519479 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
PCDHGB4-201ENST00000519479 CAPN6Q9Y6Q1 641 aa12.17□□□□□ -0.46
PCDHGB4-201ENST00000519479 SLC26A4O43511 780 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 PSAPP07602 524 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 KLRC1P26715 233 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SOX5P35711 763 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 EHD4Q9H223 541 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SLC16A3O15427 465 aaKnown RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 EZRP15311 586 aaKnown RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ECE1P42892 770 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 PPP2R5AQ15172 486 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ACER1Q8TDN7 264 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 FMO2Q99518 471 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 VCPKMTQ9H867 229 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 KLRC4O43908 158 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 NR1D1P20393 614 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 LIG3P49916 1009 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SNX1Q13596 522 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 GADL1Q6ZQY3 521 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 HSD3B7Q9H2F3 369 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 ZNF211Q13398 564 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 BEND6Q5SZJ8 279 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 RIN2Q8WYP3 895 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 GAKO14976 1311 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
PCDHGB4-201ENST00000519479 DENND3A2RUS2 1198 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 HGSO14964 777 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 HSPA6P17066 643 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 KRT76Q01546 638 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 UAP1Q16222 522 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 CEP128Q6ZU80 1094 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ANKRD42Q8N9B4 389 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 GRK7Q8WTQ7 553 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 FERMT1Q9BQL6 677 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 TMEM39BQ9GZU3 492 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 HACL1Q9UJ83 578 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 A0A087X0T9 212 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ZNF233A6NK53 670 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 FTLP02792 175 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 FAM228BP0C875 321 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 CYP2C19P33261 490 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 FMO5P49326 533 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 SCFD1Q8WVM8 642 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 MTMR9Q96QG7 549 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 RUSC1Q9BVN2 902 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 EHD2Q9NZN4 543 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 GBP1P32455 592 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 KAZNQ674X7 775 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 MTRQ99707 1265 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 ODF2LQ9ULJ1 636 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 PLCH1Q4KWH8 1693 aa12.15□□□□□ -0.46
PCDHGB4-201ENST00000519479 NID2Q14112 1375 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 EVI5O60447 810 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 GPC5P78333 572 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 CDK17Q00537 523 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 PDCLQ13371 301 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 RASA3Q14644 834 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 NAB2Q15742 525 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 PAPD7Q5XG87 772 aaKnown RBP12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms