RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 RNF216Q9NWF9 866 aaPredicted RBP25.83■■□□□ 1.73
CLDND1-230ENST00000514537 COL4A4P53420 1690 aaPredicted RBP25.83■■□□□ 1.73
CLDND1-230ENST00000514537 NLRP7Q8WX94 980 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 DYDC2Q96IM9 177 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 MTMR9Q96QG7 549 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 JPH2Q9BR39 696 aaPredicted RBP25.82■■□□□ 1.72
CLDND1-230ENST00000514537 LXNQ9BS40 222 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 RGL1Q9NZL6 768 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 SUCLA2Q9P2R7 463 aaPredicted RBP25.82■■□□□ 1.72
CLDND1-230ENST00000514537 PCDHA12Q9UN75 941 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 PPME1Q9Y570 386 aa25.82■■□□□ 1.72
CLDND1-230ENST00000514537 MRPL42Q9Y6G3 142 aaKnown RBP25.82■■□□□ 1.72
CLDND1-230ENST00000514537 NEMFO60524 1076 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 GATMP50440 423 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 NPEPPSP55786 919 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 TFF2Q03403 129 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 ZNF579Q8NAF0 562 aaKnown RBP25.81■■□□□ 1.72
CLDND1-230ENST00000514537 FBXO18Q8NFZ0 1043 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 HLA-CQ95604 372 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 SCLT1Q96NL6 688 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 C11orf84Q9BUA3 381 aaPredicted RBP25.81■■□□□ 1.72
CLDND1-230ENST00000514537 PLVAPQ9BX97 442 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 ZSWIM4Q9H7M6 989 aa25.81■■□□□ 1.72
CLDND1-230ENST00000514537 SLITRK3O94933 977 aa25.8■■□□□ 1.72
CLDND1-230ENST00000514537 IBSPP21815 317 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 YWHABP31946 246 aaKnown RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 CTTNQ14247 550 aaKnown RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 AAK1Q2M2I8 961 aa25.8■■□□□ 1.72
CLDND1-230ENST00000514537 CEP170P1Q96L14 293 aa25.8■■□□□ 1.72
CLDND1-230ENST00000514537 HSD17B14Q9BPX1 270 aa25.8■■□□□ 1.72
CLDND1-230ENST00000514537 FOXP1Q9H334 677 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 ELAC1Q9H777 363 aaKnown RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 TTC12Q9H892 705 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-230ENST00000514537 ZSCAN20P17040 1043 aaPredicted RBP25.79■■□□□ 1.72
CLDND1-230ENST00000514537 TXKP42681 527 aa25.79■■□□□ 1.72
CLDND1-230ENST00000514537 PAN2Q504Q3 1202 aaKnown RBP25.79■■□□□ 1.72
CLDND1-230ENST00000514537 OTUD6AQ7L8S5 288 aa25.79■■□□□ 1.72
CLDND1-230ENST00000514537 EXOC8Q8IYI6 725 aa25.79■■□□□ 1.72
CLDND1-230ENST00000514537 FAM184AQ8NB25 1140 aa25.79■■□□□ 1.72
CLDND1-230ENST00000514537 EIF2AK1Q9BQI3 630 aaKnown RBP25.79■■□□□ 1.72
CLDND1-230ENST00000514537 GCOM2Q9BZD3 368 aaPredicted RBP25.79■■□□□ 1.72
CLDND1-230ENST00000514537 DHX33Q9H6R0 707 aaKnown RBP25.79■■□□□ 1.72
CLDND1-230ENST00000514537 TMEM161AQ9NX61 479 aa25.79■■□□□ 1.72
CLDND1-230ENST00000514537 A0A087WZ62 844 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 CYP4A11Q02928 519 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 FAM102BQ5T8I3 360 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 ZNF410Q86VK4 478 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 RHPN2Q8IUC4 686 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 TPH2Q8IWU9 490 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 IL27Q8NEV9 243 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 SLC7A3Q8WY07 619 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 FDXACB1Q9BRP7 624 aaPredicted RBP25.78■■□□□ 1.72
CLDND1-230ENST00000514537 TMEM60Q9H2L4 133 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 ATP6V0A4Q9HBG4 840 aa25.78■■□□□ 1.72
CLDND1-230ENST00000514537 ZBTB39O15060 712 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 GRM6O15303 877 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 CSDE1O75534 798 aaKnown RBP25.77■■□□□ 1.72
CLDND1-230ENST00000514537 LYPLA2O95372 231 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 BMP1P13497 986 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 ATP2B1P20020 1258 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 FGFR4P22455 802 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 RFC5P40937 340 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 TIGD5Q53EQ6 642 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 NAALADL2Q58DX5 795 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 P2RX5Q93086 422 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 LMAN2LQ9H0V9 348 aa25.77■■□□□ 1.72
CLDND1-230ENST00000514537 UPF2Q9HAU5 1272 aaKnown RBP25.77■■□□□ 1.72
CLDND1-230ENST00000514537 TBKBP1A7MCY6 615 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 ST18O60284 1047 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 MCM7P33993 719 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 POLGP54098 1239 aaPredicted RBP25.76■■□□□ 1.71
CLDND1-230ENST00000514537 KSR1Q8IVT5 923 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 NEK9Q8TD19 979 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 INO80BQ9C086 356 aaPredicted RBP25.76■■□□□ 1.71
CLDND1-230ENST00000514537 PLAGL2Q9UPG8 496 aa25.76■■□□□ 1.71
CLDND1-230ENST00000514537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.75■■□□□ 1.71
CLDND1-230ENST00000514537 KCNQ1P51787 676 aa25.75■■□□□ 1.71
CLDND1-230ENST00000514537 ORC2Q13416 577 aaPredicted RBP25.75■■□□□ 1.71
CLDND1-230ENST00000514537 XKR9Q5GH70 373 aa25.75■■□□□ 1.71
CLDND1-230ENST00000514537 ECHDC2Q86YB7 292 aa25.75■■□□□ 1.71
CLDND1-230ENST00000514537 NSUN3Q9H649 340 aaKnown RBP25.75■■□□□ 1.71
CLDND1-230ENST00000514537 CHST12Q9NRB3 414 aa25.75■■□□□ 1.71
CLDND1-230ENST00000514537 RALGAPA2Q2PPJ7 1873 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 MUC3AQ02505 3323 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 BRWD1Q9NSI6 2320 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 A0A0U1RQF3 1178 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 FGFR1P11362 822 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 NOSTRINQ8IVI9 506 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 ADAMTS19Q8TE59 1207 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 PRPF31Q8WWY3 499 aaKnown RBP25.74■■□□□ 1.71
CLDND1-230ENST00000514537 TMEM143Q96AN5 459 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 IFT122Q9HBG6 1241 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 ALG13Q9NP73 1137 aaKnown RBP25.74■■□□□ 1.71
CLDND1-230ENST00000514537 RNF19AQ9NV58 838 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 COL4A3BPQ9Y5P4 624 aa25.74■■□□□ 1.71
CLDND1-230ENST00000514537 GAS2O43903 313 aaKnown RBP25.73■■□□□ 1.71
CLDND1-230ENST00000514537 ITGB1P05556 798 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 SFPQP23246 707 aaKnown RBP eCLIP25.73■■□□□ 1.71
CLDND1-230ENST00000514537 CAMK1Q14012 370 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 EMC2Q15006 297 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms