RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 BROXQ5VW32 411 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 CEP135Q66GS9 1140 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 KLHL10Q6JEL2 608 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 LLGL2Q6P1M3 1020 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 PGBD2Q6P3X8 592 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 KIF18BQ86Y91 864 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 SLC44A2Q8IWA5 706 aaPredicted RBP7.03□□□□□ -1.28
CHD1-208ENST00000512392 MIGA1Q8NAN2 632 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 PPP1R14CQ8TAE6 165 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 HTRA1Q92743 480 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 RILPL2Q969X0 211 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ADAM19Q9H013 955 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ZWILCHQ9H900 591 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 FANCFQ9NPI8 374 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 TMOD4Q9NZQ9 345 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ZHX1Q9UKY1 873 aaPredicted RBP7.03□□□□□ -1.28
CHD1-208ENST00000512392 ZNF711Q9Y462 761 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 GUCA1CO95843 209 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 ALDH2P05091 517 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 MYCLP12524 364 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 NID1P14543 1247 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 TECP42680 631 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 NOP2P46087 812 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 KCNJ6P48051 423 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 CD151P48509 253 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 TPD52P55327 224 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 FAPQ12884 760 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 SURF1Q15526 300 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 NUTM2GQ5VZR2 741 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 ABRAXAS1Q6UWZ7 409 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 LIX1LQ8IVB5 337 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 IQCF2Q8IXL9 164 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 GOT1L1Q8NHS2 421 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 ERCC4Q92889 916 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 PTPRN2Q92932 1015 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 PHKBQ93100 1093 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 MAELQ96JY0 434 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 HHIPQ96QV1 700 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 NUP62CLQ9H1M0 184 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 XAB2Q9HCS7 855 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 HAUS2Q9NVX0 235 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 KNSTRNQ9Y448 316 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 PDE2AO00408 941 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 KIF5CO60282 957 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 STARD3NLO95772 234 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 CYP17A1P05093 508 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 SELPP16109 830 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 MCM2P49736 904 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 CLCN2P51788 898 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 POLR2FP61218 127 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 RAC1P63000 192 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 ZNF423Q2M1K9 1284 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 ALKBH5Q6P6C2 394 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 CNSTQ6PJW8 725 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 CEP68Q76N32 757 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 NLRC3Q7RTR2 1065 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 SYTL1Q8IYJ3 562 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 PLD6Q8N2A8 252 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 FNIP1Q8TF40 1166 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 NXPE3Q969Y0 559 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 TMEM41AQ96HV5 264 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 MS4A5Q9H3V2 200 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 ZNF277Q9NRM2 450 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 HOXC10Q9NYD6 342 aa7.02□□□□□ -1.29
CHD1-208ENST00000512392 C19orf53Q9UNZ5 99 aaPredicted RBP7.02□□□□□ -1.29
CHD1-208ENST00000512392 H3BML4 177 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 INO80B-WBP1J3KQ70 363 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 PLOD2O00469 737 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 FFAR2O15552 330 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 DGKIO75912 1065 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 TP53P04637 393 aaPredicted RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 STMN1P16949 149 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 ANP32AP39687 249 aaKnown RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 SESN3P58005 492 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 IL1RL1Q01638 556 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 TMED1Q13445 227 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 STARD3Q14849 445 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 PLCL1Q15111 1095 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 CNN3Q15417 329 aaKnown RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 SMAD2Q15796 467 aaKnown RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 PFKFB4Q16877 469 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 FAM110CQ1W6H9 321 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 WSCD2Q2TBF2 565 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 SHQ1Q6PI26 577 aaKnown RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 ILDR2Q71H61 639 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 IGSF22Q8N9C0 903 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 SLC5A5Q92911 643 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 RAI14Q9P0K7 980 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 SLC13A4Q9UKG4 626 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 TRIM33Q9UPN9 1127 aa7.01□□□□□ -1.29
CHD1-208ENST00000512392 MTF2Q9Y483 593 aaPredicted RBP7.01□□□□□ -1.29
CHD1-208ENST00000512392 PRR36Q9H6K5 1346 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms