RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 CYP2R1Q6VVX0 501 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 UBE3BQ7Z3V4 1068 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 SPATS2Q86XZ4 545 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 PLD6Q8N2A8 252 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 IGSF22Q8N9C0 903 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 PI4K2BQ8TCG2 481 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 SUCLG2Q96I99 432 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 TTC1Q99614 292 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 ISCA1Q9BUE6 129 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 IFT22Q9H7X7 185 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 CRTAC1Q9NQ79 661 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 CWC25Q9NXE8 425 aaPredicted RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 UBN2Q6ZU65 1347 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 ZNF891A8MT65 544 aaPredicted RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 ERVV-1B6SEH8 477 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 TRAF5O00463 557 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 FKTNO75072 461 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 KATNA1O75449 491 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 APPP05067 770 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 MTMR1Q13613 665 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 CCDC181Q5TID7 509 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 NOL8Q76FK4 1167 aaKnown RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 DEFB132Q7Z7B7 95 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 SIRT2Q8IXJ6 389 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 RAVER1Q8IY67 606 aaKnown RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 ANKRD44Q8N8A2 993 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 USP7Q93009 1102 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 CDADC1Q9BWV3 514 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 RWDD1Q9H446 243 aaPredicted RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.57□□□□□ -1.04
RFC1-213ENST00000512275 LRRC4CQ9HCJ2 640 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 ERVK13-1Q9NX77 482 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 SLC5A4Q9NY91 659 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 FBXL7Q9UJT9 491 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 APOBEC2Q9Y235 224 aaKnown RBP8.57□□□□□ -1.04
RFC1-213ENST00000512275 COQ6Q9Y2Z9 468 aa8.57□□□□□ -1.04
RFC1-213ENST00000512275 UTYO14607 1347 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 USP42Q9H9J4 1324 aaKnown RBP8.56□□□□□ -1.04
RFC1-213ENST00000512275 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
RFC1-213ENST00000512275 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 M0R2C6 588 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 SOD2P04179 222 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 RFC4P35249 363 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 HDAC1Q13547 482 aaPredicted RBP8.56□□□□□ -1.04
RFC1-213ENST00000512275 TMEM177Q53S58 311 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 ZPBP2Q6X784 338 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 SKAP1Q86WV1 359 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 CCDC191Q8NCU4 936 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 TMEM52Q8NDY8 209 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 ATP13A1Q9HD20 1204 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
RFC1-213ENST00000512275 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 PCDHA2Q9Y5H9 948 aa8.56□□□□□ -1.04
RFC1-213ENST00000512275 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
RFC1-213ENST00000512275 PNMA6EA0A0J9YXQ4 647 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 SSU72P8A0A1W2PR75 194 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 TGFB1P01137 390 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 ADCYAP1R1P41586 468 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 ID4P47928 161 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 SCNN1BP51168 640 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 TTF1Q15361 905 aaPredicted RBP8.55□□□□□ -1.04
RFC1-213ENST00000512275 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 OVCH1Q7RTY7 1134 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 PPP1R42Q7Z4L9 355 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 CPNE8Q86YQ8 564 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 RPAP2Q8IXW5 612 aaPredicted RBP8.55□□□□□ -1.04
RFC1-213ENST00000512275 KAZALD1Q96I82 304 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 CAMKK2Q96RR4 588 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 TRIM8Q9BZR9 551 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 PUS7LQ9H0K6 701 aaKnown RBP8.55□□□□□ -1.04
RFC1-213ENST00000512275 BICC1Q9H694 974 aaKnown RBP8.55□□□□□ -1.04
RFC1-213ENST00000512275 IPPKQ9H8X2 491 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 TFCP2L1Q9NZI6 479 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 PPARGC1AQ9UBK2 798 aaKnown RBP8.55□□□□□ -1.04
RFC1-213ENST00000512275 B4GALT6Q9UBX8 382 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 TAF1P21675 1872 aa8.55□□□□□ -1.04
RFC1-213ENST00000512275 C7orf72A4D263 438 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 PRR19A6NJB7 356 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 SRGAP3O43295 1099 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 MED26O95402 600 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 TBC1D8O95759 1140 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 PCCAP05165 728 aaPredicted RBP8.54□□□□□ -1.04
RFC1-213ENST00000512275 SRGAP2CP0DJJ0 459 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
RFC1-213ENST00000512275 GRK2P25098 689 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 GRK3P35626 688 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 EPHB1P54762 984 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 ATP8B2P98198 1209 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 EGR3Q06889 387 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms