RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PLSCR1O15162 318 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 PPM1FP49593 454 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 AMPD3Q01432 767 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 LSM12Q3MHD2 195 aaKnown RBP4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 MAP9Q49MG5 647 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 CT47A1Q5JQC4 288 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 YOD1Q5VVQ6 348 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 IPO4Q8TEX9 1081 aaKnown RBP4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 FEZ1Q99689 392 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 ALG1Q9BT22 464 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 FANCLQ9NW38 375 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 TRAF6Q9Y4K3 522 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 CFAP69A5D8W1 941 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 FAM90A27PA6NNH2 459 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 MATN2O00339 956 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 TBX3O15119 743 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 NARSO43776 548 aaKnown RBP4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 FGAP02671 866 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 MYL3P08590 195 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 CPEP16870 476 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 PTPN1P18031 435 aaKnown RBP4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ATF3P18847 181 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ADCY8P40145 1251 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ETV4P43268 484 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 KCNQ1P51787 676 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 KCTD2Q14681 263 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 TBR1Q16650 682 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ARHGAP36Q6ZRI8 547 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 C1orf210Q8IVY1 113 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 FTSJ3Q8IY81 847 aaKnown RBP4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 SYNPOQ8N3V7 929 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 STAG1Q8WVM7 1258 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 FAM89AQ96GI7 184 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 RNPC3Q96LT9 517 aaKnown RBP4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 PLA2G12BQ9BX93 195 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 KIAA1683Q9H0B3 1180 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 IFT122Q9HBG6 1241 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZNF69Q9UC07 566 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 SRPK3Q9UPE1 567 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 LZTS1Q9Y250 596 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 RABGAP1Q9Y3P9 1069 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 SLC30A1Q9Y6M5 507 aa4.37□□□□□ -1.71
HMGB3P15-201ENST00000507326 ARHGAP6O43182 974 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 C1SP09871 688 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 IFIT2P09913 472 aaKnown RBP4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 EVA1CP58658 441 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 IL13RA1P78552 427 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 DUSP8Q13202 625 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 PDE1CQ14123 709 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 GRAMD1BQ3KR37 738 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 ALFQ53S48 1182 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 MAMDC4Q6UXC1 1216 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 C16orf86Q6ZW13 317 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 LARP4Q71RC2 724 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 CREBRFQ8IUR6 639 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 CHPFQ8IZ52 775 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 CPXCR1Q8N123 301 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZNF808Q8N4W9 903 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 FBXO41Q8TF61 875 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 DEPDC7Q96QD5 511 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 TRIM8Q9BZR9 551 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZDHHC5Q9C0B5 715 aa4.36□□□□□ -1.71
HMGB3P15-201ENST00000507326 MAN2B1O00754 1011 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 KLF4O43474 513 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 HMGCRP04035 888 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 LDHCP07864 332 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 NBPF7P0C2Y1 421 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 U2AF1L5P0DN76 240 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 KRT15P19012 456 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 PTGS1P23219 599 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 MC4RP32245 332 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 MCM7P33993 719 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 U2AF1Q01081 240 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 KRTAP1-1Q07627 177 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 PAK1Q13153 545 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 GPR19Q15760 415 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 GJC2Q5T442 439 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 SYCP2LQ5T4T6 812 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 SLC4A10Q6U841 1118 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 MTDHQ86UE4 582 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 PTRH1Q86Y79 214 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 NLGN4XQ8N0W4 816 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 LRRC47Q8N1G4 583 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 MSL3Q8N5Y2 521 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 ST13P5Q8NFI4 369 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 IL17DQ8TAD2 202 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 SH3TC2Q8TF17 1288 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 SECISBP2LQ93073 1101 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 TRIM44Q96DX7 344 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 PLEKHG4BQ96PX9 1271 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 ARNT2Q9HBZ2 717 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 INCENPQ9NQS7 918 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 CATSPERZQ9NTU4 200 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 CDC42EP3Q9UKI2 254 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 NAP1L2Q9ULW6 460 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 GTF2A1LQ9UNN4 478 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 PLAAQ9Y263 795 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 ATP23Q9Y6H3 246 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms