RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 KHSRPQ92945 711 aaKnown RBP eCLIP22.46■■□□□ 1.193e-7■■■□□ 17.8
UBE2D3-220ENST00000505307 SCLT1Q96NL6 688 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 POP1Q99575 1024 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 NAP1L4Q99733 375 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 TYW1Q9NV66 732 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 CCDC194A0A1B0GVG4 234 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 DKC1O60832 514 aaKnown RBP eCLIP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 GCFC2P16383 781 aaKnown RBP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 ZP2Q05996 745 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 SCRN1Q12765 414 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 SMAD4Q13485 552 aaKnown RBP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 GJA10Q969M2 543 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 FAM20AQ96MK3 541 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 AIFM3Q96NN9 605 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 JPH2Q9BR39 696 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 PHF20Q9BVI0 1012 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 DACT1Q9NYF0 836 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 SEPT9Q9UHD8 586 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 CD207Q9UJ71 328 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 ARIH1Q9Y4X5 557 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 WDR81Q562E7 1941 aa22.45■■□□□ 1.18
UBE2D3-220ENST00000505307 C19orf67A6NJJ6 358 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 MBTPS2O43462 519 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 PFKFB2O60825 505 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 EIF5BO60841 1220 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 FGF18O76093 207 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 NDUFV1P49821 464 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 PSMC5P62195 406 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 DLX2Q07687 328 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 INF2Q27J81 1249 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 PPP4R3AQ6IN85 833 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 THNSL1Q8IYQ7 743 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 ABI1Q8IZP0 508 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 COLGALT1Q8NBJ5 622 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 MICAL1Q8TDZ2 1067 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 NLRP7Q8WX94 980 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 RSPH1Q8WYR4 309 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 GCOM2Q9BZD3 368 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 TLR9Q9NR96 1032 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 LZTS1Q9Y250 596 aa22.44■■□□□ 1.18
UBE2D3-220ENST00000505307 ATG2AQ2TAZ0 1938 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 FNDC1Q4ZHG4 1894 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 KIAA1671Q9BY89 1806 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 IGKV6-21A0A0C4DH24 114 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 TBX10O75333 385 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 EOMESO95936 686 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 FGFR1P11362 822 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 GTF2F1P35269 517 aaKnown RBP eCLIP22.43■■□□□ 1.187e-7■■■□□ 15.7
UBE2D3-220ENST00000505307 IRS1P35568 1242 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 PPP2R5CQ13362 524 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 LETM2Q2VYF4 491 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 MTERF2Q49AM1 385 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 NEK8Q86SG6 692 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 ECHDC2Q86YB7 292 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 EXOC8Q8IYI6 725 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 LRRC43Q8N309 656 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 WASF1Q92558 559 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 CDCA3Q99618 268 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 INO80BQ9C086 356 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 CWH43Q9H720 699 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 CHST12Q9NRB3 414 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 PUF60Q9UHX1 559 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 KCNJ14Q9UNX9 436 aa22.43■■□□□ 1.18
UBE2D3-220ENST00000505307 A0A0U1RQF3 1178 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 DDX11L8A8MPP1 907 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 TBX3O15119 743 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 STBD1O95210 358 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 EYA4O95677 639 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 PLCB3Q01970 1234 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 ERICH6BQ5W0A0 696 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 ADGRD2Q7Z7M1 963 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 ZNF410Q86VK4 478 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 MSLNLQ96KJ4 702 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 CASD1Q96PB1 797 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 CEP89Q96ST8 783 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 TLE6Q9H808 572 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 KCNMB3Q9NPA1 279 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 TPCN1Q9ULQ1 816 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 HCN4Q9Y3Q4 1203 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 PPME1Q9Y570 386 aa22.42■■□□□ 1.18
UBE2D3-220ENST00000505307 FAM86C2PA6NEL3 165 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 LINC01565O15544 149 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 MAFO75444 373 aaPredicted RBP22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 PPM1AP35813 382 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 NRIP1P48552 1158 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 COASYQ13057 564 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 CLUL1Q15846 466 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 C11orf16Q9NQ32 467 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
UBE2D3-220ENST00000505307 DCXO43602 365 aa22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 SLC37A4O43826 429 aa22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 SFPQP23246 707 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■□□□□ 10.5
UBE2D3-220ENST00000505307 QARSP47897 775 aaKnown RBP22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 MRPS27Q92552 414 aaKnown RBP22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 ZNF668Q96K58 619 aaPredicted RBP22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 ZNF558Q96NG5 402 aa22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 TRAIPQ9BWF2 469 aa22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 RNF19AQ9NV58 838 aa22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 SUCLA2Q9P2R7 463 aaPredicted RBP22.4■■□□□ 1.18
UBE2D3-220ENST00000505307 CARNS1A5YM72 827 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms