RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 PIP4K2AP48426 406 aaPredicted RBP7.31□□□□□ -1.24
NFKB1-203ENST00000502367 EPHA10Q5JZY3 1008 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 KCNT2Q6UVM3 1135 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 CABP7Q86V35 215 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 TP53I13Q8NBR0 393 aaPredicted RBP7.31□□□□□ -1.24
NFKB1-203ENST00000502367 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 CHMP4AQ9BY43 222 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
NFKB1-203ENST00000502367 AOX1Q06278 1338 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 RFXAPO00287 272 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 FFAR3O14843 346 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 PRODHO43272 600 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 DDIT3P35638 169 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
NFKB1-203ENST00000502367 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 COPS6Q7L5N1 327 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 UNC5CLQ8IV45 518 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 ZDHHC14Q8IZN3 488 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 NETO2Q8NC67 525 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 DDX11Q96FC9 970 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 TRMT2BQ96GJ1 504 aaKnown RBP7.3□□□□□ -1.24
NFKB1-203ENST00000502367 C20orf173Q96LM9 149 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 LRRCC1Q9C099 1032 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 SLIT2O94813 1529 aa7.3□□□□□ -1.24
NFKB1-203ENST00000502367 COL5A3P25940 1745 aaPredicted RBP7.3□□□□□ -1.24
NFKB1-203ENST00000502367 BCL9O00512 1426 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 GRM8O00222 908 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 RAB11FIP3O75154 756 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 NCAM1P13591 858 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 MYL6BP14649 208 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 PFKLP17858 780 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 ATP2B1P20020 1258 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 MX1P20591 662 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 RFX5P48382 616 aaPredicted RBP7.29□□□□□ -1.24
NFKB1-203ENST00000502367 NTRK3Q16288 839 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 MARCH10Q8NA82 808 aaPredicted RBP7.29□□□□□ -1.24
NFKB1-203ENST00000502367 SMARCC2Q8TAQ2 1214 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 FEZF2Q8TBJ5 459 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 FNIP1Q8TF40 1166 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 ZNF526Q8TF50 670 aaPredicted RBP7.29□□□□□ -1.24
NFKB1-203ENST00000502367 OSBP2Q969R2 916 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 SNX21Q969T3 373 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 TSPAN17Q96FV3 270 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 PEX11GQ96HA9 241 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 JAM3Q9BX67 310 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 PALD1Q9ULE6 856 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 NUP98P52948 1817 aa7.29□□□□□ -1.24
NFKB1-203ENST00000502367 ZNF831Q5JPB2 1677 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 CASZ1Q86V15 1759 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 SASH1O94885 1247 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 CPP00450 1065 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 LTBRP36941 435 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 AIMP1Q12904 312 aaKnown RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 GCKRQ14397 625 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 E4F1Q66K89 784 aaPredicted RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 IQCEQ6IPM2 695 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 TTLL7Q6ZT98 887 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 MILR1Q7Z6M3 343 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 RBM12BQ8IXT5 1001 aaKnown RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 CCDC140Q96MF4 163 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 MYD88Q99836 296 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 IL25Q9H293 177 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 BICC1Q9H694 974 aaKnown RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 UPF2Q9HAU5 1272 aaKnown RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 IL1RAPL2Q9NP60 686 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 CLDND1Q9NY35 253 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 PA2G4Q9UQ80 394 aaKnown RBP7.28□□□□□ -1.24
NFKB1-203ENST00000502367 FAN1Q9Y2M0 1017 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 THSD7AQ9UPZ6 1657 aa7.28□□□□□ -1.24
NFKB1-203ENST00000502367 LRP5O75197 1615 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 AGRPO00253 132 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 SURF6O75683 361 aaKnown RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 DDX58O95786 925 aaKnown RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 A1BGP04217 495 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 HOXA5P20719 270 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 STAT5AP42229 794 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 SMAD4Q13485 552 aaKnown RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 HSP90AA2PQ14568 343 aaPredicted RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 TARBP2Q15633 366 aaKnown RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 RABL6Q3YEC7 729 aaPredicted RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 ACBD5Q5T8D3 534 aaPredicted RBP7.27□□□□□ -1.25
NFKB1-203ENST00000502367 FOXB2Q5VYV0 432 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 TTLL10Q6ZVT0 673 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 CKAP2LQ8IYA6 745 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 TTC5Q8N0Z6 440 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 PLBD2Q8NHP8 589 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 KCTD13Q8WZ19 329 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 PIGBQ92521 554 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 KIF1BPQ96EK5 621 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 IL17RAQ96F46 866 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 KCNC2Q96PR1 638 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 EPN3Q9H201 632 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
NFKB1-203ENST00000502367 ZCCHC4Q9H5U6 513 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms