RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 FBXO47Q5MNV8 452 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 CNKSR3Q6P9H4 555 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 TSHZ1Q6ZSZ6 1077 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 RHPN2Q8IUC4 686 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 SYT2Q8N9I0 419 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-214ENST00000498107 NLRP7Q8WX94 980 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 SEPT8Q92599 483 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 TMEM143Q96AN5 459 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 PLIN2Q99541 437 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
SSBP1-214ENST00000498107 TIPINQ9BVW5 301 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-214ENST00000498107 XPNPEP1Q9NQW7 623 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 GINS2Q9Y248 185 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 SCN5AQ14524 2016 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 EFCAB14O75071 495 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 GPR32O75388 356 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 SSBP05455 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 PLA2G4BP0C869 781 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 ACRP10323 421 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 GPC3P51654 580 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 DRP2Q13474 957 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 MBTPS1Q14703 1052 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 KIZQ2M2Z5 673 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 AXDND1Q5T1B0 1012 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 ADALQ6DHV7 355 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 LARP4BQ92615 738 aaKnown RBP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 RAD54LQ92698 747 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
SSBP1-214ENST00000498107 GCOM2Q9BZD3 368 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-214ENST00000498107 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 GHRP10912 638 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 ARL2P36404 184 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 STAT6P42226 847 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 IKBKEQ14164 716 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 LPIN1Q14693 890 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 PPP2R5AQ15172 486 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 PLEKHG4Q58EX7 1191 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 ZNF365Q70YC5 407 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 KCNK18Q7Z418 384 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 TDHQ8IZJ6 230 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSBP1-214ENST00000498107 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
SSBP1-214ENST00000498107 POLR3FQ9H1D9 316 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-214ENST00000498107 ADAMTS10Q9H324 1103 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 KCNG1Q9UIX4 513 aa17.74■□□□□ 0.43
SSBP1-214ENST00000498107 ABHD14A-ACY1A0A1B0GW23 586 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 GPR182O15218 404 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 RPS6KA5O75582 802 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 EIF4BP23588 611 aaKnown RBP17.73■□□□□ 0.43
SSBP1-214ENST00000498107 EPHB4P54760 987 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 SLC12A3P55017 1021 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 POU5F1BQ06416 359 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 PAK2Q13177 524 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 GPNMBQ14956 572 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 RINT1Q6NUQ1 792 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 IQUBQ8NA54 791 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 HERVK_113Q902F9 699 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 IFT74Q96LB3 600 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 NLRP4Q96MN2 994 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 PPP1R16BQ96T49 567 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 OSMRQ99650 979 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 CUEDC2Q9H467 287 aa17.73■□□□□ 0.43
SSBP1-214ENST00000498107 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 DARSP14868 501 aaKnown RBP17.72■□□□□ 0.43
SSBP1-214ENST00000498107 CMA1P23946 247 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 GUCY2CP25092 1073 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 PHKA2P46019 1235 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
SSBP1-214ENST00000498107 C1orf186Q6ZWK4 172 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 SV2BQ7L1I2 683 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 MAEAQ7L5Y9 396 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
SSBP1-214ENST00000498107 LRRC27Q9C0I9 530 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 C17orf75Q9HAS0 396 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 BLOC1S4Q9NUP1 217 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 PCDH10Q9P2E7 1040 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 TET1Q8NFU7 2136 aa17.72■□□□□ 0.43
SSBP1-214ENST00000498107 SIP14410 1827 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 A0A087WZ62 844 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 KRT18P05783 430 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms