RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	TMEM169	Q96HH4	297 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CYP26B1	Q9NR63	512 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TCEAL9	Q9UHQ7	104 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZBTB42	B2RXF5	422 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SH2B2	O14492	632 aa	Predicted RBP	18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	EOMES	O95936	686 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	VTN	P04004	478 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RXRA	P19793	462 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ADCY7	P51828	1080 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TTC22	Q5TAA0	569 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PPP1R18	Q6NYC8	613 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MAP4K1	Q92918	833 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CDH22	Q9UJ99	828 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	AKT3	Q9Y243	479 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MYO15A	Q9UKN7	3530 aa		18.81	■□□□□ 0.6
SUPT20H-223	ENST00000497318	EIF4B	P23588	611 aa	Known RBP	18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	NLRP11	P59045	1033 aa	Known RBP	18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	AP3B2	Q13367	1082 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	OTOP3	Q7RTS5	596 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CABP7	Q86V35	215 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RTP3	Q9BQQ7	232 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ANO3	Q9BYT9	981 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SMOC2	Q9H3U7	446 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TBC1D22B	Q9NU19	505 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RNF19A	Q9NV58	838 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	DACT1	Q9NYF0	836 aa		18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.8	■□□□□ 0.6
SUPT20H-223	ENST00000497318		A0A0U1RQF3	1178 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	IPO5	O00410	1097 aa	Known RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SGSM2	O43147	1006 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	WEE2	P0C1S8	567 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	AOC1	P19801	751 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SREBF1	P36956	1147 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	POLG	P54098	1239 aa	Predicted RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	BCAR1	P56945	870 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PPFIBP1	Q86W92	1011 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PLA2G4D	Q86XP0	818 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	VPS52	Q8N1B4	723 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	C12orf76	Q8N812	135 aa	Predicted RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	FAM167A	Q96KS9	214 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SCLT1	Q96NL6	688 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SEMA4A	Q9H3S1	761 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	FBXL21	Q9UKT6	434 aa		18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RBM8A	Q9Y5S9	174 aa	Known RBP	18.79	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PLXNA3	P51805	1871 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	EP300	Q09472	2414 aa	Predicted RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SPDYE4	A6NLX3	237 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	hCG_1984214	I3L0E3	225 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PSAP	P07602	524 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	GSPT1	P15170	499 aa	Known RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ATP4A	P20648	1035 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	METAP2	P50579	478 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TDG	Q13569	410 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CLLU1OS	Q5K130	101 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	WWC2	Q6AWC2	1192 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZNF746	Q6NUN9	644 aa	Predicted RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	EFCAB12	Q6NXP0	572 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZNF713	Q8N859	430 aa	Predicted RBP	18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	HELQ	Q8TDG4	1101 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	KCNG4	Q8TDN1	519 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PGBD1	Q96JS3	809 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ADAMTS10	Q9H324	1103 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	IRAK3	Q9Y616	596 aa		18.78	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZNF292	O60281	2723 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SMCO2	A6NFE2	343 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CLCN3	P51790	818 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ANGPT1	Q15389	498 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MICU3	Q86XE3	530 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CCDC105	Q8IYK2	499 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	DTWD2	Q8NBA8	298 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ZNF577	Q9BSK1	485 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	NRBP2	Q9NSY0	501 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RBM28	Q9NW13	759 aa	Known RBP	18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	STK39	Q9UEW8	545 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PCDHA10	Q9Y5I2	948 aa		18.77	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MYO10	Q9HD67	2058 aa		18.77	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DHX15	O43143	795 aa	Known RBP	18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CTSA	P10619	480 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CDC42EP1	Q00587	391 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	TMC5	Q6UXY8	1006 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CCDC149	Q6ZUS6	474 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DDX53	Q86TM3	631 aa	Known RBP	18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	ZNF598	Q86UK7	904 aa	Known RBP	18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	RAB11FIP4	Q86YS3	637 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	ZBP1	Q9H171	429 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SFXN1	Q9H9B4	322 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	VPS13A	Q96RL7	3174 aa		18.76	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LOXHD1	Q8IVV2	1947 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	NT5C1B-RDH14	C9J2C7	533 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	STK25	O00506	426 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SKI	P12755	728 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DARS	P14868	501 aa	Known RBP	18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	EPCAM	P16422	314 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	RFX1	P22670	979 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SET	Q01105	290 aa	Predicted RBP	18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms