RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 ARID3AQ99856 593 aa23.23■■□□□ 1.31
FGFR1-223ENST00000496296 TIPINQ9BVW5 301 aa23.23■■□□□ 1.31
FGFR1-223ENST00000496296 NHEJ1Q9H9Q4 299 aaPredicted RBP23.23■■□□□ 1.31
FGFR1-223ENST00000496296 BACH1O14867 736 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 UBA1P22314 1058 aaKnown RBP23.22■■□□□ 1.31
FGFR1-223ENST00000496296 STXBP4Q6ZWJ1 553 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 EPM2AIP1Q7L775 607 aaPredicted RBP23.22■■□□□ 1.31
FGFR1-223ENST00000496296 EHBP1Q8NDI1 1231 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 MORC4Q8TE76 937 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 GOLGA1Q92805 767 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 ARGLU1Q9NWB6 273 aaPredicted RBP23.22■■□□□ 1.31
FGFR1-223ENST00000496296 LCA5LO95447 670 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 ABL1P00519 1130 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 SUPT20HL2P0C7V6 817 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 ADORA2AP29274 412 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 ZNF131P52739 623 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 AMPD2Q01433 879 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 WHAMMP3Q1A5X7 153 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 XKR9Q5GH70 373 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 PCMTD1Q96MG8 357 aaPredicted RBP23.22■■□□□ 1.31
FGFR1-223ENST00000496296 FGFBP2Q9BYJ0 223 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 BCAS3Q9H6U6 928 aa23.22■■□□□ 1.31
FGFR1-223ENST00000496296 SORBS3O60504 671 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 MAPK4P31152 587 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 CLCN6P51797 869 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 INHBEP58166 350 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 BMT2Q1RMZ1 405 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 TRIM59Q8IWR1 403 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 NELFCDQ8IXH7 590 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 ZNF446Q9NWS9 450 aa23.21■■□□□ 1.31
FGFR1-223ENST00000496296 SFI1A8K8P3 1242 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 HIP1RO75146 1068 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 ATG7O95352 703 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 GCNT3O95395 438 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 UTP14CQ5TAP6 766 aaKnown RBP23.2■■□□□ 1.3
FGFR1-223ENST00000496296 BAP1Q92560 729 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 MLXIPQ9HAP2 919 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 FAM184BQ9ULE4 1060 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 TRAF3IP3Q9Y228 551 aa23.2■■□□□ 1.3
FGFR1-223ENST00000496296 USO1O60763 962 aaKnown RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 FARP2O94887 1054 aaPredicted RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 CBX1P83916 185 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 ZNF792Q3KQV3 632 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 TRMT1LQ7Z2T5 733 aaKnown RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 GPR142Q7Z601 462 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 FAM178BQ8IXR5 827 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 ZNF302Q9NR11 478 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 LARSQ9P2J5 1176 aaKnown RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 EIF3DO15371 548 aaKnown RBP eCLIP23.19■■□□□ 1.34e-8■□□□□ 9.3
FGFR1-223ENST00000496296 KRT86O43790 486 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 SLC10A3P09131 477 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 KNOP1Q1ED39 458 aaKnown RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 METTL7BQ6UX53 244 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 CCDC60Q8IWA6 550 aaPredicted RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 SYN2Q92777 582 aaPredicted RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 DRC1Q96MC2 740 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 NUCKS1Q9H1E3 243 aaKnown RBP23.19■■□□□ 1.3
FGFR1-223ENST00000496296 POLD4Q9HCU8 107 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 TLL2Q9Y6L7 1015 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
FGFR1-223ENST00000496296 SYNGAP1Q96PV0 1343 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 ATP8B1O43520 1251 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 ZRANB2O95218 330 aaKnown RBP eCLIP23.18■■□□□ 1.3
FGFR1-223ENST00000496296 GGPS1O95749 300 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 MYBP10242 640 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 CASP5P51878 434 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 KCNMA1Q12791 1236 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 ANO5Q75V66 913 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 PLEKHH3Q7Z736 793 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 CCDC102AQ96A19 550 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 CEP170P1Q96L14 293 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 TSGA10Q9BZW7 698 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 IGSF9BQ9UPX0 1349 aa23.18■■□□□ 1.3
FGFR1-223ENST00000496296 EPHB6O15197 1021 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 IPO7O95373 1038 aaKnown RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 VAV2P52735 878 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 CHMP4BP1P59074 171 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 PRKCEQ02156 737 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 TAF1CQ15572 869 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 LY6KQ17RY6 165 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 CCDC40Q4G0X9 1142 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 XKR3Q5GH77 459 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 PLA2G4FQ68DD2 849 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 PDXDC1Q6P996 788 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 ARMCX2Q7L311 632 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 ZNF467Q7Z7K2 595 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 DPP9Q86TI2 863 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 JAKMIP2Q96AA8 810 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 UBE4BO95155 1302 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 ZNFX1Q9P2E3 1918 aaKnown RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 IGF2BP3O00425 579 aaKnown RBP eCLIP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 CALUO43852 315 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 ZNF862O60290 1169 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 MAPK8IP2Q13387 824 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 TTLL4Q14679 1199 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 CCDC122Q5T0U0 273 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 FAM160B1Q5W0V3 765 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 SEPT1Q8WYJ6 367 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms