RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TARBP2Q15633 366 aaKnown RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 XKR3Q5GH77 459 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 MOXD1Q6UVY6 613 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 NEK8Q86SG6 692 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 KLHL23Q8NBE8 558 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 RDM1Q8NG50 284 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 SPPL3Q8TCT6 385 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 C11orf84Q9BUA3 381 aaPredicted RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 NIFKQ9BYG3 293 aaKnown RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 NSUN3Q9H649 340 aaKnown RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 ATP6V0A4Q9HBG4 840 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 CLDND1Q9NY35 253 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 HCSTQ9UBK5 93 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 RWDD3Q9Y3V2 267 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 ITGB1P05556 798 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 FGFR1P11362 822 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 IL9P15248 144 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 EIF4BP23588 611 aaKnown RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
MSH5-218ENST00000494646 IRS1P35568 1242 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 KRT2P35908 639 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 FAM189BP81408 668 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 DSC3Q14574 896 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 TIGD5Q53EQ6 642 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 PLA2G4FQ68DD2 849 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 PPP4R3AQ6IN85 833 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 ANO5Q75V66 913 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 KSR1Q8IVT5 923 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 FAM177A1Q8N128 213 aaPredicted RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 RNF169Q8NCN4 708 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 NSUN7Q8NE18 718 aaKnown RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 WASF1Q92558 559 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 HAS1Q92839 578 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 GTF3C6Q969F1 213 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 CEP89Q96ST8 783 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
MSH5-218ENST00000494646 TYW1Q9NV66 732 aaKnown RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 SUCLA2Q9P2R7 463 aaPredicted RBP10.78□□□□□ -0.68
MSH5-218ENST00000494646 A0A087WZ62 844 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 BTBD18B2RXH4 712 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 ZBTB39O15060 712 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 LINC01565O15544 149 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 MAFO75444 373 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 QARSP47897 775 aaKnown RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 DNM2P50570 870 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 NPEPPSP55786 919 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 PSMC5P62195 406 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 GUCY1B3Q02153 619 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 HYAL1Q12794 435 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 CLUL1Q15846 466 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 NCAPH2Q6IBW4 605 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 RBM23Q86U06 439 aaKnown RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 RHPN2Q8IUC4 686 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 MICAL1Q8TDZ2 1067 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 P2RX5Q93086 422 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 DYDC2Q96IM9 177 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 FAM20AQ96MK3 541 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 FDXACB1Q9BRP7 624 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 LMAN2LQ9H0V9 348 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 KCNMB3Q9NPA1 279 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 CD320Q9NPF0 282 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 BMP2KQ9NSY1 1161 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 RGL1Q9NZL6 768 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 WRAP73Q9P2S5 460 aaPredicted RBP10.77□□□□□ -0.69
MSH5-218ENST00000494646 VAV3Q9UKW4 847 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
MSH5-218ENST00000494646 IGKV6-21A0A0C4DH24 114 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 P4HBP07237 508 aaKnown RBP10.76□□□□□ -0.69
MSH5-218ENST00000494646 DARSP14868 501 aaKnown RBP10.76□□□□□ -0.69
MSH5-218ENST00000494646 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 LTBRP36941 435 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 PPP2R5CQ13362 524 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 CTTNQ14247 550 aaKnown RBP10.76□□□□□ -0.69
MSH5-218ENST00000494646 EPHA7Q15375 998 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 LRRC55Q6ZSA7 311 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 ADGRD2Q7Z7M1 963 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 NEK9Q8TD19 979 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 KHSRPQ92945 711 aaKnown RBP eCLIP10.76□□□□□ -0.69
MSH5-218ENST00000494646 CEP170P1Q96L14 293 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
MSH5-218ENST00000494646 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 CWH43Q9H720 699 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms