RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PLIN2Q99541 437 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 ATP6V0A4Q9HBG4 840 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 PADI3Q9ULW8 664 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 DNM3Q9UQ16 869 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 NOC2LQ9Y3T9 749 aaKnown RBP15.08■□□□□ 0
COL1A1-208ENST00000494334 EVPLQ92817 2033 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 ARHGEF35A5YM69 484 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 SLC26A4O43511 780 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 RPS6KA5O75582 802 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 EYA4O95677 639 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 TMEM119Q4V9L6 283 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 PADI6Q6TGC4 694 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 USP49Q70CQ1 688 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 KCTD17Q8N5Z5 321 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
COL1A1-208ENST00000494334 PRPF31Q8WWY3 499 aaKnown RBP15.07■□□□□ 0
COL1A1-208ENST00000494334 NLRP7Q8WX94 980 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 PSPC1Q8WXF1 523 aaKnown RBP15.07■□□□□ 0
COL1A1-208ENST00000494334 EPSTI1Q96J88 318 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 CCSER1Q9C0I3 900 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 CFAP45Q9UL16 551 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 COL4A3BPQ9Y5P4 624 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 SLC4A7Q9Y6M7 1214 aa15.07■□□□□ 0
COL1A1-208ENST00000494334 LAMA3Q16787 3333 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 A0A087WZ62 844 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 SOX1O00570 391 aaPredicted RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 ASAP2O43150 1006 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 CYP11B2P19099 503 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 EIF4BP23588 611 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 ARL2P36404 184 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 ANP32AP39687 249 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 NFX1Q12986 1120 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 PAK2Q13177 524 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 KARSQ15046 597 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 MAEAQ7L5Y9 396 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 ZNF410Q86VK4 478 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 FAM228AQ86W67 206 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 CALML4Q96GE6 196 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 CHAMP1Q96JM3 812 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 NLRP4Q96MN2 994 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 FDXACB1Q9BRP7 624 aaPredicted RBP15.06■□□□□ 0
COL1A1-208ENST00000494334 ST3GAL5Q9UNP4 418 aa15.06■□□□□ 0
COL1A1-208ENST00000494334 TRIOBPQ9H2D6 2365 aa15.05■□□□□ 0
COL1A1-208ENST00000494334 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.05■□□□□ -0
COL1A1-208ENST00000494334 GRXCR1A8MXD5 290 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 GPR182O15218 404 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 EFCAB14O75071 495 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 DARSP14868 501 aaKnown RBP15.05■□□□□ -0
COL1A1-208ENST00000494334 NUCB2P80303 420 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 LAMTOR4Q0VGL1 99 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.05■□□□□ -0
COL1A1-208ENST00000494334 MCPH1Q8NEM0 835 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 PHOSPHO2Q8TCD6 241 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 ASAP3Q8TDY4 903 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 LRRC15Q8TF66 581 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 SCLT1Q96NL6 688 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 GCOM2Q9BZD3 368 aaPredicted RBP15.05■□□□□ -0
COL1A1-208ENST00000494334 TMX1Q9H3N1 280 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 IFT122Q9HBG6 1241 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 ERVK-5Q9HDB9 667 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 GPRC5CQ9NQ84 441 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 RCOR1Q9UKL0 485 aa15.05■□□□□ -0
COL1A1-208ENST00000494334 ENPP3O14638 875 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 CSDE1O75534 798 aaKnown RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 PLA2G4BP0C869 781 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 SRGAP2CP0DJJ0 459 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 ATP2A2P16615 1042 aaKnown RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 GLRA2P23416 452 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 KCNJ6P48051 423 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 DEFB103AP81534 67 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 SMAD3P84022 425 aaKnown RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 MXD4Q14582 209 aaPredicted RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 ODR4Q5SWX8 454 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 FAM102BQ5T8I3 360 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 RINT1Q6NUQ1 792 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 C1orf186Q6ZWK4 172 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 RTN4RL1Q86UN2 441 aaPredicted RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 SYT2Q8N9I0 419 aaPredicted RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 RNF149Q8NC42 400 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 RASSF8Q8NHQ8 419 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 KCNG4Q8TDN1 519 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 LINC01599Q8WXQ3 324 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 LRCH3Q96II8 777 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 SLC9A7Q96T83 725 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 FTHL17Q9BXU8 183 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 POLR3FQ9H1D9 316 aaPredicted RBP15.04■□□□□ -0
COL1A1-208ENST00000494334 POLD4Q9HCU8 107 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 BLOC1S4Q9NUP1 217 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 ATP6V1DQ9Y5K8 247 aa15.04■□□□□ -0
COL1A1-208ENST00000494334 SIP14410 1827 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 CUTAO60888 179 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 PLCG1P19174 1290 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 FGFR4P22455 802 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms