RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	LRFN2	Q9ULH4	789 aa		21.09	■□□□□ 0.97
ABCA2-222	ENST00000494046	WDR81	Q562E7	1941 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	GPR182	O15218	404 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	MBD3	O95983	291 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	STAG3L1	P0CL83	205 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	BMP1	P13497	986 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	PDC	P20941	246 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	DRP2	Q13474	957 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	PTPRO	Q16827	1216 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	PPP4R3A	Q6IN85	833 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	POTED	Q86YR6	584 aa		21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	NECAB3	Q96P71	396 aa	Predicted RBP	21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	MRPL42	Q9Y6G3	142 aa	Known RBP	21.08	■□□□□ 0.97
ABCA2-222	ENST00000494046	STBD1	O95210	358 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	NCL	P19338	710 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	TARBP2	Q15633	366 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	AAK1	Q2M2I8	961 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	XKR3	Q5GH77	459 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	CHAMP1	Q96JM3	812 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	UHRF1	Q96T88	793 aa	Predicted RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	ADAMTS10	Q9H324	1103 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	VAV3	Q9UKW4	847 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	MTMR6	Q9Y217	621 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	NLRC5	Q86WI3	1866 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	MARCH6	O60337	910 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	GCFC2	P16383	781 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	SARS	P49591	514 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	HAS1	Q92839	578 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	CLP1	Q92989	425 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	TNFRSF25	Q93038	417 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	FAM20A	Q96MK3	541 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	SCLT1	Q96NL6	688 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	NIFK	Q9BYG3	293 aa	Known RBP	21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	BRMS1	Q9HCU9	246 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	RGS18	Q9NS28	235 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	PCDHB7	Q9Y5E2	793 aa		21.07	■□□□□ 0.96
ABCA2-222	ENST00000494046	GRM6	O15303	877 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	MRE11	P49959	708 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	PPP2R5C	Q13362	524 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	ODR4	Q5SWX8	454 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	PLA2G4F	Q68DD2	849 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	CMTR2	Q8IYT2	770 aa	Known RBP	21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	GPT2	Q8TD30	523 aa		21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	TCF20	Q9UGU0	1960 aa	Known RBP	21.06	■□□□□ 0.96
ABCA2-222	ENST00000494046	BTBD18	B2RXH4	712 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	C5orf67	F2Z3F1	127 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	CSDE1	O75534	798 aa	Known RBP	21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	RB1	P06400	928 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	FGFR4	P22455	802 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	GPC3	P51654	580 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	PSMC5	P62195	406 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	FAM102B	Q5T8I3	360 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	LARP1B	Q659C4	914 aa	Known RBP	21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	SLC24A5	Q71RS6	500 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	ANO5	Q75V66	913 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	TMEM87A	Q8NBN3	555 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	NLRP7	Q8WX94	980 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	CEP89	Q96ST8	783 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	C11orf84	Q9BUA3	381 aa	Predicted RBP	21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	ALG13	Q9NP73	1137 aa	Known RBP	21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046	RWDD3	Q9Y3V2	267 aa		21.05	■□□□□ 0.96
ABCA2-222	ENST00000494046		C9IYK1	514 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	TNFRSF10A	O00220	468 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	MMP1	P03956	469 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	EIF4B	P23588	611 aa	Known RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	TCEAL5	Q5H9L2	206 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	CAVIN1	Q6NZI2	390 aa	Known RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	DIS3L2	Q8IYB7	885 aa	Known RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	UBE2Z	Q9H832	354 aa	Predicted RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	C1orf112	Q9NSG2	853 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	WRAP73	Q9P2S5	460 aa	Predicted RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	RALGAPA2	Q2PPJ7	1873 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	QARS	P47897	775 aa	Known RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	GUCY1B3	Q02153	619 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	DSC3	Q14574	896 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	TIGD5	Q53EQ6	642 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	NCAPH2	Q6IBW4	605 aa		21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	NAP1L4	Q99733	375 aa	Known RBP	21.04	■□□□□ 0.96
ABCA2-222	ENST00000494046	VPS37C	A5D8V6	355 aa	Predicted RBP	21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	TBKBP1	A7MCY6	615 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	WNT7A	O00755	349 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	FGFR1	P11362	822 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	KCNA5	P22460	613 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	NPEPPS	P55786	919 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	TRIM29	Q14134	588 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	ZNF579	Q8NAF0	562 aa	Known RBP	21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	LLPH	Q9BRT6	129 aa	Known RBP	21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	RGL1	Q9NZL6	768 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	HCST	Q9UBK5	93 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	BRWD1	Q9NSI6	2320 aa		21.03	■□□□□ 0.96
ABCA2-222	ENST00000494046	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	IGKV6-21	A0A0C4DH24	114 aa		21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	TBX3	O15119	743 aa		21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	DARS	P14868	501 aa	Known RBP	21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	ZNF445	P59923	1031 aa		21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	FOXD4L3	Q6VB84	417 aa	Predicted RBP	21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	EP400NL	Q6ZTU2	488 aa		21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	NSUN3	Q9H649	340 aa	Known RBP	21.02	■□□□□ 0.96
ABCA2-222	ENST00000494046	PLAGL2	Q9UPG8	496 aa		21.02	■□□□□ 0.96

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms