RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	LPP	Q93052	612 aa		4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	GFM2	Q969S9	779 aa	Known RBP	4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	RPL10L	Q96L21	214 aa	Known RBP	4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	CLUHP3	Q96NS8	147 aa		4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	OSBPL2	Q9H1P3	480 aa		4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	CABP5	Q9NP86	173 aa		4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	ACSS2	Q9NR19	701 aa		4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS36-205	ENST00000492650	UBA6	A0AVT1	1052 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	PTPDC1	A2A3K4	754 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650		H7C1D1	291 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	OVOL3	O00110	214 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	DVL2	O14641	736 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	CYP27B1	O15528	508 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	MAF	O75444	373 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	PRL	P01236	227 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	MECP2	P51608	486 aa	Known RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	ADCY7	P51828	1080 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	ANTXR2	P58335	489 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	TUBA3C	Q13748	450 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	BMS1	Q14692	1282 aa	Known RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	ZNF174	Q15697	407 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	DGKD	Q16760	1214 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	CRB2	Q5IJ48	1285 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	SLFN12L	Q6IEE8	588 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	TUBA3E	Q6PEY2	450 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	ANKRD53	Q8N9V6	530 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	CHST14	Q8NCH0	376 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	CACTIN	Q8WUQ7	758 aa	Known RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	NEU4	Q8WWR8	484 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	MAML3	Q96JK9	1138 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	TUBGCP5	Q96RT8	1024 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	MPHOSPH9	Q99550	1183 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	SLC6A15	Q9H2J7	730 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	SH3BP1	Q9Y3L3	701 aa		4.91	□□□□□ -1.62
VPS36-205	ENST00000492650	C2orf78	A6NCI8	922 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	ASL	P04424	464 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	CYP17A1	P05093	508 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	BPIFB4	P59827	614 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	TCIRG1	Q13488	830 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	NFE2L2	Q16236	605 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	FNDC3B	Q53EP0	1204 aa	Known RBP	4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	TTC38	Q5R3I4	469 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	PIK3R6	Q5UE93	754 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	PRAMEF9	Q5VWM5	478 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	KIAA1958	Q8N8K9	716 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	OR5AN1	Q8NGI8	311 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	TRIM8	Q9BZR9	551 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	PARPBP	Q9NWS1	579 aa		4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	HECA	Q9UBI9	543 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	REXO2	Q9Y3B8	237 aa	Known RBP	4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	TNPO3	Q9Y5L0	923 aa	Known RBP	4.9	□□□□□ -1.63
VPS36-205	ENST00000492650	TRAF5	O00463	557 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	APOL3	O95236	402 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	FLT3	P36888	993 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	ZNF460	Q14592	562 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	RRP1B	Q14684	758 aa	Known RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	KRT40	Q6A162	431 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	UBE2R2	Q712K3	238 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	GAREM2	Q75VX8	874 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	GSPT2	Q8IYD1	628 aa	Known RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	ANKRD35	Q8N283	1001 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	RPGR	Q92834	1020 aa	Known RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	MRFAP1L1	Q96HT8	127 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	DYDC2	Q96IM9	177 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	MMRN2	Q9H8L6	949 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	KCMF1	Q9P0J7	381 aa		4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	WDR33	Q9C0J8	1336 aa	Known RBP	4.89	□□□□□ -1.63
VPS36-205	ENST00000492650	DAPK3	O43293	454 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	DNAJC8	O75937	253 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	ADH4	P08319	380 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	JMJD7	P0C870	316 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	HSP90B1	P14625	803 aa	Known RBP	4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	SLC9A1	P19634	815 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	MAK	P20794	623 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	PTX3	P26022	381 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	CNGB1	Q14028	1251 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	FAM111B	Q6SJ93	734 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	NME9	Q86XW9	330 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	TMPRSS6	Q8IU80	811 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	PLA2G15	Q8NCC3	412 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	ZNF483	Q8TF39	744 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	MIEF2	Q96C03	454 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	CHFR	Q96EP1	664 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	C16orf92	Q96LL3	132 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	WDR92	Q96MX6	357 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	GPHA2	Q96T91	129 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	CEP72	Q9P209	647 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	DNAI1	Q9UI46	699 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	RCAN3	Q9UKA8	241 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	SYNPO2	Q9UMS6	1093 aa		4.88	□□□□□ -1.63
VPS36-205	ENST00000492650	KRTAP23-1	A1A580	65 aa		4.87	□□□□□ -1.63
VPS36-205	ENST00000492650	UBE2QL1	A1L167	161 aa		4.87	□□□□□ -1.63
VPS36-205	ENST00000492650	PPP1R12A	O14974	1030 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS36-205	ENST00000492650	BCAR1	P56945	870 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms